Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
PH02Gene49300
View in Genome Browser
Position
hic_scaffold_46:19933-28804 (+)
8871bp
Gene Type
gene
Gene Description (Protein Product)
Retinal pigment epithelial membrane protein
Organism
Phyllostachys edulis
Also AS AT3G63520

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
PH02Gene49675 Elongation factor Tu GTP binding domain
PH02Gene49991 Belongs to the glycosyltransferase 8 family
PH02Gene50943 Protein kinase domain

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0003674 molecular_function MF
GO:0003824 catalytic activity MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0005773 vacuole CC
GO:0005774 vacuolar membrane CC
GO:0005794 Golgi apparatus CC
GO:0005886 plasma membrane CC
GO:0005911 cell-cell junction CC
GO:0006629 lipid metabolic process BP
GO:0006720 isoprenoid metabolic process BP
GO:0006721 terpenoid metabolic process BP
GO:0008150 biological_process BP
GO:0008152 metabolic process BP
GO:0008300 isoprenoid catabolic process BP
GO:0009056 catabolic process BP
GO:0009506 plasmodesma CC
GO:0009987 cellular process BP
GO:0010436 carotenoid dioxygenase activity MF
GO:0012505 endomembrane system CC
GO:0016020 membrane CC
GO:0016042 lipid catabolic process BP
GO:0016108 tetraterpenoid metabolic process BP
GO:0016110 tetraterpenoid catabolic process BP
GO:0016115 terpenoid catabolic process BP
GO:0016116 carotenoid metabolic process BP
GO:0016118 carotenoid catabolic process BP
GO:0016119 carotene metabolic process BP
GO:0016121 carotene catabolic process BP
GO:0016122 xanthophyll metabolic process BP
GO:0016124 xanthophyll catabolic process BP
GO:0016491 oxidoreductase activity MF
GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen MF
GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen MF
GO:0030054 cell junction CC
GO:0031090 organelle membrane CC
GO:0042214 terpene metabolic process BP
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0044237 cellular metabolic process BP
GO:0044238 primary metabolic process BP
GO:0044242 cellular lipid catabolic process BP
GO:0044248 cellular catabolic process BP
GO:0044255 cellular lipid metabolic process BP
GO:0044422 obsolete organelle part CC
GO:0044424 obsolete intracellular part CC
GO:0044437 obsolete vacuolar part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044446 obsolete intracellular organelle part CC
GO:0044464 obsolete cell part CC
GO:0045549 9-cis-epoxycarotenoid dioxygenase activity MF
GO:0046247 terpene catabolic process BP
GO:0051213 dioxygenase activity MF
GO:0055044 symplast CC
GO:0055114 obsolete oxidation-reduction process BP
GO:0071704 organic substance metabolic process BP
GO:0071944 cell periphery CC
GO:0098588 bounding membrane of organelle CC
GO:0098805 membrane CC
GO:1901575 organic substance catabolic process BP