Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
PH02Gene50249
View in Genome Browser
Position
hic_scaffold_23:52058952-52060957 (+)
2005bp
Gene Type
gene
Gene Description (Protein Product)
Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs)
Organism
Phyllostachys edulis
Also AS AT1G59750

Gene Structure

upstream:
Get Sequence

Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
PH02Gene50651 Aux IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations
PH02Gene50429 Aux IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations
PH02Gene50249 Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs)
Regulatory gene
PH02Gene00315 SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains
PH02Gene00628 SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains
PH02Gene00888 domain associated with HOX domains
Target gene
PH02Gene00001 Plastocyanin-like domain
PH02Gene00013 DnaJ domain
PH02Gene00015 Belongs to the BetVI family

Load All Networks

Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
KEGG Pathway
KEGG Term Name Description
map04075 Plant hormone signal transduction -