Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
PH02Gene50607
View in Genome Browser
Position
hic_scaffold_3:54328046-54333228 (-)
5182bp
Gene Type
gene
Gene Description (Protein Product)
Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs)
Organism
Phyllostachys edulis
Also AS AT1G59750

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
PH02Gene50651 Aux IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations
PH02Gene50607 Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs)
PH02Gene51230 Belongs to the cyclin family
Regulatory gene
PH02Gene00239 zinc finger
PH02Gene00304 Dof domain, zinc finger
PH02Gene00552 Zinc-finger double-stranded RNA-binding
Target gene
PH02Gene00020 Protein of unknown function (DUF2985)
PH02Gene00039 Mitochondrial import inner membrane translocase subunit
PH02Gene00064 PMR5 N terminal Domain

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
KEGG Pathway
KEGG Term Name Description
map04075 Plant hormone signal transduction -