Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Pathway
Basic Information
Gene ID
PILA_23365.g
View in Genome Browser
Position
scaffold_13287:591947-596089 (+)
4142bp
Gene Type
gene
Gene Description (Protein Product)
Aminotransferase class-V
Organism
Pinus lambertiana
Also AS AT2G13360

Gene Structure

upstream:
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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
PILA_29985.g FMN-dependent dehydrogenase
PILA_36009.g The H protein shuttles the methylamine group of glycine from the P protein to the T protein
PILA_30400.g Beta-eliminating lyase
Regulatory gene
PILA_00081.g MYB-CC type transfactor, LHEQLE motif
PILA_00133.g transcription factor
PILA_00523.g isoform X1

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail


Pathway
Go Pathway KEGG Pathway
GO Term Description GO Category
GO:0001505 regulation of neurotransmitter levels BP
GO:0003674 molecular_function MF
GO:0003824 catalytic activity MF
GO:0004760 serine-pyruvate transaminase activity MF
GO:0005575 cellular_component CC
GO:0005576 extracellular region CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0005777 peroxisome CC
GO:0005886 plasma membrane CC
GO:0006082 organic acid metabolic process BP
GO:0006520 amino acid metabolic process BP
GO:0006544 glycine metabolic process BP
GO:0006545 glycine biosynthetic process BP
GO:0006807 nitrogen compound metabolic process BP
GO:0008150 biological_process BP
GO:0008152 metabolic process BP
GO:0008453 alanine-glyoxylate transaminase activity MF
GO:0008483 transaminase activity MF
GO:0008652 amino acid biosynthetic process BP
GO:0009058 biosynthetic process BP
GO:0009069 serine family amino acid metabolic process BP
GO:0009070 serine family amino acid biosynthetic process BP
GO:0009507 chloroplast CC
GO:0009532 plastid stroma CC
GO:0009536 plastid CC
GO:0009570 chloroplast stroma CC
GO:0009853 photorespiration BP
GO:0009987 cellular process BP
GO:0016020 membrane CC
GO:0016053 organic acid biosynthetic process BP
GO:0016740 transferase activity MF
GO:0016769 transferase activity, transferring nitrogenous groups MF
GO:0017144 xenobiotic metabolic process BP
GO:0019265 glycine biosynthetic process, by transamination of glyoxylate BP
GO:0019752 carboxylic acid metabolic process BP
GO:0042133 neurotransmitter metabolic process BP
GO:0042136 neurotransmitter biosynthetic process BP
GO:0042579 microbody CC
GO:0043094 cellular metabolic compound salvage BP
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0043436 oxoacid metabolic process BP
GO:0044237 cellular metabolic process BP
GO:0044238 primary metabolic process BP
GO:0044249 cellular biosynthetic process BP
GO:0044281 small molecule metabolic process BP
GO:0044283 small molecule biosynthetic process BP
GO:0044422 obsolete organelle part CC
GO:0044424 obsolete intracellular part CC
GO:0044434 obsolete chloroplast part CC
GO:0044435 obsolete plastid part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044446 obsolete intracellular organelle part CC
GO:0044464 obsolete cell part CC
GO:0046394 carboxylic acid biosynthetic process BP
GO:0048046 apoplast CC
GO:0050281 serine-glyoxylate transaminase activity MF
GO:0065007 biological regulation BP
GO:0065008 regulation of biological quality BP
GO:0071704 organic substance metabolic process BP
GO:0071944 cell periphery CC
GO:1901564 organonitrogen compound metabolic process BP
GO:1901566 organonitrogen compound biosynthetic process BP
GO:1901576 organic substance biosynthetic process BP
GO:1901605 alpha-amino acid metabolic process BP
GO:1901607 alpha-amino acid biosynthetic process BP
KEGG Term Name Description
map04146 Peroxisome Peroxisomes are essential organelles that play a key role in redox signalling and lipid homeostasis. They contribute to many crucial metabolic processes such as fatty acid oxidation, biosynthesis of ether lipids and free radical detoxification. The biogenesis of peroxisomes starts with the early peroxins PEX3, PEX16 and PEX19 and proceeds via several steps. The import of membrane proteins into peroxisomes needs PEX19 for recognition, targeting and insertion via docking at PEX3. Matrix proteins in the cytosol are recognized by peroxisomal targeting signals (PTS) and transported to the docking complex at the peroxisomal membrane. Peroxisomes' deficiencies lead to severe and often fatal inherited peroxisomal disorders (PD). PDs are usually classified in two groups. The first group is disorders of peroxisome biogenesis which include Zellweger syndrome, and the second group is single peroxisomal enzyme deficiencies.
map01110 Biosynthesis of secondary metabolites -
map01100 Metabolic pathways -
map00630 Glyoxylate and dicarboxylate metabolism -
map00260 Glycine, serine and threonine metabolism Serine is derived from 3-phospho-D-glycerate, an intermediate of glycolysis [MD:M00020], and glycine is derived from serine. Threonine is an essential amino acid, which animals cannot synthesize. In bacteria and plants, threonine is derived from aspartate [MD:M00018].
map00250 Alanine, aspartate and glutamate metabolism -