Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Pathway
Basic Information
Gene ID
PILA_37654.g
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Position
scaffold_3144:1141700-1142566 (+)
866bp
Gene Type
gene
Gene Description (Protein Product)
Splicing factor U2af small subunit
Organism
Pinus lambertiana
Also AS AT5G42820

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
PILA_37654.g Splicing factor U2af small subunit
PILA_38283.g U1 small nuclear ribonucleoprotein 70
Regulatory gene
PILA_00341.g ethylene-responsive transcription factor
PILA_00892.g bpc6, bbr bpc6, atbpc6 atbpc6
PILA_02142.g transcription factor

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail


Pathway
KEGG Pathway
KEGG Term Name Description
map03040 Spliceosome After transcription, eukaryotic mRNA precursors contain protein-coding exons and noncoding introns. In the following splicing, introns are excised and exons are joined by a macromolecular complex, the spliceosome. The standard spliceosome is made up of five small nuclear ribonucleoproteins (snRNPs), U1, U2, U4, U5, and U6 snRNPs, and several spliceosome-associated proteins (SAPs). Spliceosomes are not a simple stable complex, but a dynamic family of particles that assemble on the mRNA precursor and help fold it into a conformation that allows transesterification to proceed. Various spliceosome forms (e.g. A-, B- and C-complexes) have been identified.