Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
Pt7G23680
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Position
chr7:753944207-753945732 (-)
1525bp
Gene Type
gene
Gene Description (Protein Product)
AP-4 complex subunit epsilon
Organism
Pinus tabuliformis
Also AS AT1G31730

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
PtXG27570 Belongs to the adaptor complexes medium subunit family
PtXG22250 Ubiquitin exists either covalently attached to another protein, or free (unanchored). When covalently bound, it is conjugated to target proteins via an isopeptide bond either as a monomer (monoubiquitin), a polymer linked via different Lys residues of the ubiquitin (polyubiquitin chains) or a linear polymer linked via the initiator Met of the ubiquitin (linear polyubiquitin chains). Polyubiquitin chains, when attached to a target protein, have different functions depending on the Lys residue of the ubiquitin that is linked
PtXG22250 Ubiquitin family
Regulatory gene
Pt0G00460 Transcription factor
Pt0G02880 -
Pt0G10980 Transcription factor

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0005829 cytosol CC
GO:0005911 cell-cell junction CC
GO:0009506 plasmodesma CC
GO:0016020 membrane CC
GO:0030054 cell junction CC
GO:0030117 membrane coat CC
GO:0030119 AP-type membrane coat adaptor complex CC
GO:0030124 AP-4 adaptor complex CC
GO:0032991 protein-containing complex CC
GO:0044424 obsolete intracellular part CC
GO:0044425 obsolete membrane part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044464 obsolete cell part CC
GO:0048475 coated membrane CC
GO:0055044 symplast CC
GO:0098796 membrane protein complex CC