Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
PtXG27570
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Position
chr10:876036643-876205969 (-)
169326bp
Gene Type
gene
Gene Description (Protein Product)
Belongs to the adaptor complexes medium subunit family
Organism
Pinus tabuliformis
Also AS AT4G24550

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
PtXG41760 Belongs to the adaptor complexes medium subunit family
PtXG54140 Conserved oligomeric Golgi complex subunit
PtXG54190 Conserved oligomeric Golgi complex subunit
Regulatory gene
Pt0G00460 Transcription factor
Pt0G01110 Myb-like DNA-binding domain
Pt0G06240 Transcription factor

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0000139 Golgi membrane CC
GO:0003674 molecular_function MF
GO:0005488 binding MF
GO:0005515 protein binding MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0005768 endosome CC
GO:0005769 early endosome CC
GO:0005794 Golgi apparatus CC
GO:0005802 trans-Golgi network CC
GO:0005829 cytosol CC
GO:0006605 protein targeting BP
GO:0006622 protein targeting to lysosome BP
GO:0006623 protein targeting to vacuole BP
GO:0006810 transport BP
GO:0006886 intracellular protein transport BP
GO:0006892 post-Golgi vesicle-mediated transport BP
GO:0006895 Golgi to endosome transport BP
GO:0006896 Golgi to vacuole transport BP
GO:0007034 vacuolar transport BP
GO:0007041 lysosomal transport BP
GO:0008104 protein localization BP
GO:0008150 biological_process BP
GO:0012505 endomembrane system CC
GO:0015031 protein transport BP
GO:0015833 peptide transport BP
GO:0016020 membrane CC
GO:0016192 vesicle-mediated transport BP
GO:0016482 cytosolic transport BP
GO:0019904 protein domain specific binding MF
GO:0030117 membrane coat CC
GO:0030119 AP-type membrane coat adaptor complex CC
GO:0030124 AP-4 adaptor complex CC
GO:0031090 organelle membrane CC
GO:0031410 cytoplasmic vesicle CC
GO:0031904 endosome lumen CC
GO:0031974 membrane-enclosed lumen CC
GO:0031982 vesicle CC
GO:0031984 organelle subcompartment CC
GO:0032588 trans-Golgi network membrane CC
GO:0032991 protein-containing complex CC
GO:0033036 macromolecule localization BP
GO:0033365 protein localization to organelle BP
GO:0034613 protein localization BP
GO:0042886 amide transport BP
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0043233 organelle lumen CC
GO:0044422 obsolete organelle part CC
GO:0044424 obsolete intracellular part CC
GO:0044425 obsolete membrane part CC
GO:0044431 obsolete Golgi apparatus part CC
GO:0044433 obsolete cytoplasmic vesicle part CC
GO:0044440 obsolete endosomal part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044446 obsolete intracellular organelle part CC
GO:0044464 obsolete cell part CC
GO:0045184 establishment of protein localization BP
GO:0046907 intracellular transport BP
GO:0048193 Golgi vesicle transport BP
GO:0048475 coated membrane CC
GO:0051179 localization BP
GO:0051234 establishment of localization BP
GO:0051641 cellular localization BP
GO:0051649 establishment of localization in cell BP
GO:0061462 protein localization to lysosome BP
GO:0070013 intracellular organelle lumen CC
GO:0070727 cellular macromolecule localization BP
GO:0071702 organic substance transport BP
GO:0071705 nitrogen compound transport BP
GO:0072594 establishment of protein localization to organelle BP
GO:0072657 protein localization to membrane BP
GO:0072665 protein localization to vacuole BP
GO:0072666 establishment of protein localization to vacuole BP
GO:0090160 Golgi to lysosome transport BP
GO:0097708 intracellular vesicle CC
GO:0098588 bounding membrane of organelle CC
GO:0098791 Golgi apparatus subcompartment CC
GO:0098796 membrane protein complex CC
GO:1903361 protein localization to basolateral plasma membrane BP
GO:1990778 protein localization to cell periphery BP