Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
Pt8G12140
View in Genome Browser
Position
chr8:415103100-415107411 (+)
4311bp
Gene Type
gene
Gene Description (Protein Product)
Ycf1
Organism
Pinus tabuliformis
Also AS ATCG01130

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
Pt9G01950 Photosystem I assembly protein Ycf4
Pt9G18460 ATP synthase epsilon chain
Pt8G58570 ribosomal protein S7
Regulatory gene
Pt0G30790 Myb family transcription factor
Pt2G38070 transcription factor
Pt2G44150 PHR1-LIKE 1-like

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0003674 molecular_function MF
GO:0005215 transporter activity MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0006810 transport BP
GO:0008104 protein localization BP
GO:0008150 biological_process BP
GO:0008565 obsolete protein transporter activity MF
GO:0009507 chloroplast CC
GO:0009526 plastid envelope CC
GO:0009528 plastid inner membrane CC
GO:0009536 plastid CC
GO:0009706 chloroplast inner membrane CC
GO:0009941 chloroplast envelope CC
GO:0015031 protein transport BP
GO:0015833 peptide transport BP
GO:0016020 membrane CC
GO:0019866 organelle inner membrane CC
GO:0031090 organelle membrane CC
GO:0031967 organelle envelope CC
GO:0031969 chloroplast membrane CC
GO:0031975 envelope CC
GO:0033036 macromolecule localization BP
GO:0042170 plastid membrane CC
GO:0042886 amide transport BP
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0044422 obsolete organelle part CC
GO:0044424 obsolete intracellular part CC
GO:0044434 obsolete chloroplast part CC
GO:0044435 obsolete plastid part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044446 obsolete intracellular organelle part CC
GO:0044464 obsolete cell part CC
GO:0045184 establishment of protein localization BP
GO:0051179 localization BP
GO:0051234 establishment of localization BP
GO:0071702 organic substance transport BP
GO:0071705 nitrogen compound transport BP