Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
PtXG09070
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Position
chr10:271943150-271944314 (-)
1164bp
Gene Type
gene
Gene Description (Protein Product)
Vacuolar protein sorting-associated protein 55 homolog
Organism
Pinus tabuliformis
Also AS AT1G32410

Gene Structure

upstream:
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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
PtXG29830 xanthophyll metabolic process
PtXG29830
Regulatory gene
Pt1G12460 Protein BASIC PENTACYSTEINE6-like
Pt1G12480 Protein BASIC PENTACYSTEINE6-like
Pt3G55780

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0005768 endosome CC
GO:0005773 vacuole CC
GO:0006810 transport BP
GO:0007034 vacuolar transport BP
GO:0008150 biological_process BP
GO:0012505 endomembrane system CC
GO:0016192 vesicle-mediated transport BP
GO:0016197 endosomal transport BP
GO:0031410 cytoplasmic vesicle CC
GO:0031982 vesicle CC
GO:0032509 endosome transport via multivesicular body sorting pathway BP
GO:0032511 late endosome to vacuole transport via multivesicular body sorting pathway BP
GO:0032879 regulation of localization BP
GO:0032880 regulation of protein localization BP
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0044424 obsolete intracellular part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044464 obsolete cell part CC
GO:0045324 late endosome to vacuole transport BP
GO:0046907 intracellular transport BP
GO:0048519 negative regulation of biological process BP
GO:0050789 regulation of biological process BP
GO:0051179 localization BP
GO:0051234 establishment of localization BP
GO:0051641 cellular localization BP
GO:0051649 establishment of localization in cell BP
GO:0060341 regulation of cellular localization BP
GO:0065007 biological regulation BP
GO:0071985 multivesicular body sorting pathway BP
GO:0097708 intracellular vesicle CC
GO:1903827 regulation of protein localization BP
GO:1903828 negative regulation of protein localization BP
GO:2000008 regulation of protein localization to cell surface BP
GO:2000009 negative regulation of protein localization to cell surface BP