Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
PtXG45020
View in Genome Browser
Position
chr10:1407975018-1407981774 (-)
6756bp
Gene Type
gene
Gene Description (Protein Product)
"Tubulin is the major constituent of microtubules. It binds two moles of GTP
"Tubulin/FtsZ family
Organism
Pinus tabuliformis
Also AS AT1G50010

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
PtXG45820 Belongs to the MIP aquaporin (TC 1.A.8) family
PtXG45870 Belongs to the MIP aquaporin (TC 1.A.8) family
PtXG48500 GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle
Regulatory gene
Pt0G01630 dof zinc finger protein
Pt0G07980 dof zinc finger protein
Pt1G66310 Dof domain, zinc finger

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway KEGG Pathway
GO Term Description GO Category
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005856 cytoskeleton CC
GO:0043226 organelle CC
GO:0043228 non-membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043232 intracellular non-membrane-bounded organelle CC
GO:0044424 obsolete intracellular part CC
GO:0044464 obsolete cell part CC
GO:0000226 microtubule cytoskeleton organization BP
GO:0003674 molecular_function MF
GO:0005198 structural molecule activity MF
GO:0005200 structural constituent of cytoskeleton MF
GO:0005618 cell wall CC
GO:0005634 nucleus CC
GO:0005730 nucleolus CC
GO:0005737 cytoplasm CC
GO:0005773 vacuole CC
GO:0005829 cytosol CC
GO:0005874 microtubule CC
GO:0005886 plasma membrane CC
GO:0005911 cell-cell junction CC
GO:0006950 response to stress BP
GO:0006970 response to osmotic stress BP
GO:0006996 organelle organization BP
GO:0007010 cytoskeleton organization BP
GO:0007017 microtubule-based process BP
GO:0008150 biological_process BP
GO:0009506 plasmodesma CC
GO:0009628 response to abiotic stimulus BP
GO:0009629 response to gravity BP
GO:0009651 response to salt stress BP
GO:0009987 cellular process BP
GO:0015630 microtubule cytoskeleton CC
GO:0016020 membrane CC
GO:0016043 cellular component organization BP
GO:0030054 cell junction CC
GO:0030312 external encapsulating structure CC
GO:0031974 membrane-enclosed lumen CC
GO:0031981 nuclear lumen CC
GO:0032991 protein-containing complex CC
GO:0043227 membrane-bounded organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0043233 organelle lumen CC
GO:0044422 obsolete organelle part CC
GO:0044428 obsolete nuclear part CC
GO:0044430 obsolete cytoskeletal part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044446 obsolete intracellular organelle part CC
GO:0045298 tubulin complex CC
GO:0050896 response to stimulus BP
GO:0051716 cellular response to stimulus BP
GO:0055044 symplast CC
GO:0070013 intracellular organelle lumen CC
GO:0071214 cellular response to abiotic stimulus BP
GO:0071258 cellular response to gravity BP
GO:0071840 cellular component organization or biogenesis BP
GO:0071944 cell periphery CC
GO:0099080 supramolecular complex CC
GO:0099081 supramolecular polymer CC
GO:0099512 supramolecular fiber CC
GO:0099513 polymeric cytoskeletal fiber CC
GO:0104004 cellular response to environmental stimulus BP
KEGG Term Name Description
map04145 Phagosome Phagocytosis is the process of taking in relatively large particles by a cell, and is a central mechanism in the tissue remodeling, inflammation, and defense against infectious agents. A phagosome is formed when the specific receptors on the phagocyte surface recognize ligands on the particle surface. After formation, nascent phagosomes progressively acquire digestive characteristics. This maturation of phagosomes involves regulated interaction with the other membrane organelles, including recycling endosomes, late endosomes and lysosomes. The fusion of phagosomes and lysosomes releases toxic products that kill most bacteria and degrade them into fragments. However, some bacteria have strategies to escape the bactericidal mechanisms associated with phagocytosis and survive within host phagocytes.