Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
PtXG53600
View in Genome Browser
Position
chr10:1707961564-1708014585 (-)
53021bp
Gene Type
gene
Gene Description (Protein Product)
"May act early in the ethylene signal transduction pathway
Organism
Pinus tabuliformis
Also AS AT1G66340

Gene Structure

upstream:
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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
PtXG53610 May act early in the ethylene signal transduction pathway, possibly as an ethylene receptor, or as a regulator of the pathway
PtXG53600 May act early in the ethylene signal transduction pathway, possibly as an ethylene receptor, or as a regulator of the pathway
Regulatory gene
Pt0G01630 dof zinc finger protein
Pt0G07980 dof zinc finger protein
Pt1G12460 Protein BASIC PENTACYSTEINE6-like

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway KEGG Pathway
GO Term Description GO Category
GO:0000160 phosphorelay signal transduction system BP
GO:0001101 response to acid chemical BP
GO:0002237 response to molecule of bacterial origin BP
GO:0003674 molecular_function MF
GO:0003824 catalytic activity MF
GO:0004672 protein kinase activity MF
GO:0004673 protein histidine kinase activity MF
GO:0005488 binding MF
GO:0005515 protein binding MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0005783 endoplasmic reticulum CC
GO:0006464 protein modification process BP
GO:0006468 protein phosphorylation BP
GO:0006725 cellular aromatic compound metabolic process BP
GO:0006793 phosphorus metabolic process BP
GO:0006796 phosphate-containing compound metabolic process BP
GO:0006807 nitrogen compound metabolic process BP
GO:0006950 response to stress BP
GO:0006952 defense response BP
GO:0006970 response to osmotic stress BP
GO:0007154 cell communication BP
GO:0007165 signal transduction BP
GO:0008150 biological_process BP
GO:0008152 metabolic process BP
GO:0009058 biosynthetic process BP
GO:0009266 response to temperature stimulus BP
GO:0009308 amine metabolic process BP
GO:0009408 response to heat BP
GO:0009593 detection of chemical stimulus BP
GO:0009605 response to external stimulus BP
GO:0009607 response to biotic stimulus BP
GO:0009617 response to bacterium BP
GO:0009625 response to insect BP
GO:0009628 response to abiotic stimulus BP
GO:0009651 response to salt stress BP
GO:0009690 cytokinin metabolic process BP
GO:0009719 response to endogenous stimulus BP
GO:0009720 detection of hormone stimulus BP
GO:0009723 response to ethylene BP
GO:0009725 response to hormone BP
GO:0009726 detection of endogenous stimulus BP
GO:0009727 detection of ethylene stimulus BP
GO:0009733 response to auxin BP
GO:0009737 response to abscisic acid BP
GO:0009739 response to gibberellin BP
GO:0009743 response to carbohydrate BP
GO:0009755 hormone-mediated signaling pathway BP
GO:0009756 carbohydrate mediated signaling BP
GO:0009873 ethylene-activated signaling pathway BP
GO:0009888 tissue development BP
GO:0009966 regulation of signal transduction BP
GO:0009968 negative regulation of signal transduction BP
GO:0009987 cellular process BP
GO:0010033 response to organic substance BP
GO:0010035 response to inorganic substance BP
GO:0010038 response to metal ion BP
GO:0010039 response to iron ion BP
GO:0010087 phloem or xylem histogenesis BP
GO:0010104 regulation of ethylene-activated signaling pathway BP
GO:0010105 negative regulation of ethylene-activated signaling pathway BP
GO:0010119 regulation of stomatal movement BP
GO:0010182 sugar mediated signaling pathway BP
GO:0010646 regulation of cell communication BP
GO:0010648 negative regulation of cell communication BP
GO:0010817 regulation of hormone levels BP
GO:0012505 endomembrane system CC
GO:0016043 cellular component organization BP
GO:0016301 kinase activity MF
GO:0016310 phosphorylation BP
GO:0016740 transferase activity MF
GO:0016772 transferase activity, transferring phosphorus-containing groups MF
GO:0016773 phosphotransferase activity, alcohol group as acceptor MF
GO:0016775 phosphotransferase activity, nitrogenous group as acceptor MF
GO:0016999 antibiotic metabolic process BP
GO:0017000 antibiotic biosynthetic process BP
GO:0017144 xenobiotic metabolic process BP
GO:0018106 peptidyl-histidine phosphorylation BP
GO:0018193 peptidyl-amino acid modification BP
GO:0018202 peptidyl-histidine modification BP
GO:0019538 protein metabolic process BP
GO:0023051 regulation of signaling BP
GO:0023052 signaling BP
GO:0023057 negative regulation of signaling BP
GO:0032502 developmental process BP
GO:0032870 cellular response to hormone stimulus BP
GO:0033036 macromolecule localization BP
GO:0033037 polysaccharide localization BP
GO:0033554 cellular response to stress BP
GO:0033993 response to lipid BP
GO:0034754 hormone metabolic process BP
GO:0035556 intracellular signal transduction BP
GO:0036211 protein modification process BP
GO:0038023 signaling receptor activity MF
GO:0038199 ethylene receptor activity MF
GO:0042221 response to chemical BP
GO:0042445 hormone metabolic process BP
GO:0042545 cell wall modification BP
GO:0042562 hormone binding MF
GO:0042742 defense response to bacterium BP
GO:0042743 hydrogen peroxide metabolic process BP
GO:0042802 identical protein binding MF
GO:0043170 macromolecule metabolic process BP
GO:0043207 response to external biotic stimulus BP
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0043412 macromolecule modification BP
GO:0044237 cellular metabolic process BP
GO:0044238 primary metabolic process BP
GO:0044249 cellular biosynthetic process BP
GO:0044260 cellular macromolecule metabolic process BP
GO:0044267 protein metabolic process BP
GO:0044424 obsolete intracellular part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044464 obsolete cell part CC
GO:0045229 external encapsulating structure organization BP
GO:0046483 heterocycle metabolic process BP
GO:0048519 negative regulation of biological process BP
GO:0048523 negative regulation of cellular process BP
GO:0048580 regulation of post-embryonic development BP
GO:0048583 regulation of response to stimulus BP
GO:0048585 negative regulation of response to stimulus BP
GO:0048856 anatomical structure development BP
GO:0050665 hydrogen peroxide biosynthetic process BP
GO:0050789 regulation of biological process BP
GO:0050793 regulation of developmental process BP
GO:0050794 regulation of cellular process BP
GO:0050896 response to stimulus BP
GO:0051179 localization BP
GO:0051186 obsolete cofactor metabolic process BP
GO:0051188 obsolete cofactor biosynthetic process BP
GO:0051239 regulation of multicellular organismal process BP
GO:0051301 cell division BP
GO:0051606 detection of stimulus BP
GO:0051641 cellular localization BP
GO:0051704 obsolete multi-organism process BP
GO:0051707 response to other organism BP
GO:0051716 cellular response to stimulus BP
GO:0051740 ethylene binding MF
GO:0052386 cell wall thickening BP
GO:0052482 defense response by cell wall thickening BP
GO:0052542 defense response by callose deposition BP
GO:0052543 callose deposition in cell wall BP
GO:0052544 defense response by callose deposition in cell wall BP
GO:0052545 callose localization BP
GO:0060089 molecular transducer activity MF
GO:0065007 biological regulation BP
GO:0065008 regulation of biological quality BP
GO:0070297 regulation of phosphorelay signal transduction system BP
GO:0070298 negative regulation of phosphorelay signal transduction system BP
GO:0070727 cellular macromolecule localization BP
GO:0070887 cellular response to chemical stimulus BP
GO:0071241 cellular response to inorganic substance BP
GO:0071248 cellular response to metal ion BP
GO:0071281 cellular response to iron ion BP
GO:0071310 cellular response to organic substance BP
GO:0071322 cellular response to carbohydrate stimulus BP
GO:0071369 cellular response to ethylene stimulus BP
GO:0071495 cellular response to endogenous stimulus BP
GO:0071554 cell wall organization or biogenesis BP
GO:0071555 cell wall organization BP
GO:0071704 organic substance metabolic process BP
GO:0071840 cellular component organization or biogenesis BP
GO:0072328 alkene binding MF
GO:0072593 reactive oxygen species metabolic process BP
GO:0097305 response to alcohol BP
GO:0098542 defense response to other organism BP
GO:0140096 catalytic activity, acting on a protein MF
GO:1900140 regulation of seedling development BP
GO:1901564 organonitrogen compound metabolic process BP
GO:1901700 response to oxygen-containing compound BP
GO:1901701 cellular response to oxygen-containing compound BP
GO:1902531 regulation of intracellular signal transduction BP
GO:1902532 negative regulation of intracellular signal transduction BP
GO:1903409 reactive oxygen species biosynthetic process BP
GO:2000026 regulation of multicellular organismal development BP
KEGG Term Name Description
map04075 Plant hormone signal transduction -