Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
PITA_37305.g
View in Genome Browser
Position
C4167787:4669-7099 (+)
2430bp
Gene Type
gene
Gene Description (Protein Product)
glycoside hydrolase family 28 protein polygalacturonase (pectinase) family protein
Organism
Pinus taeda
Also AS AT3G07970

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
PITA_43627.g Acts in the modification of cell walls via demethylesterification of cell wall pectin
PITA_42287.g pectinesterase
PITA_48834.g Acts in the modification of cell walls via demethylesterification of cell wall pectin
Regulatory gene
PITA_00088.g NAC domain-containing protein
PITA_00097.g NAC domain containing protein 28
PITA_00229.g LOB domain-containing protein

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway KEGG Pathway
GO Term Description GO Category
GO:0005575 cellular_component CC
GO:0005618 cell wall CC
GO:0005623 obsolete cell CC
GO:0005886 plasma membrane CC
GO:0009505 plant-type cell wall CC
GO:0016020 membrane CC
GO:0030312 external encapsulating structure CC
GO:0031224 obsolete intrinsic component of membrane CC
GO:0031225 obsolete anchored component of membrane CC
GO:0031226 obsolete intrinsic component of plasma membrane CC
GO:0044425 obsolete membrane part CC
GO:0044459 obsolete plasma membrane part CC
GO:0044464 obsolete cell part CC
GO:0046658 obsolete anchored component of plasma membrane CC
GO:0071944 cell periphery CC
KEGG Term Name Description
map01100 Metabolic pathways -
map00040 Pentose and glucuronate interconversions -