Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
PITA_42287.g
View in Genome Browser
Position
scaffold65397:7697-11104 (-)
3407bp
Gene Type
gene
Gene Description (Protein Product)
pectinesterase
Organism
Pinus taeda
Also AS AT5G19730

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
PITA_46277.g Pectate lyase
PITA_46768.g glycoside hydrolase family 28 protein polygalacturonase (pectinase) family protein
PITA_49143.g N-terminal domain of oxidoreductase
Regulatory gene
PITA_00010.g Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs)
PITA_00328.g B3 DNA binding domain
PITA_00931.g Transcription factor

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway KEGG Pathway
GO Term Description GO Category
GO:0000272 polysaccharide catabolic process BP
GO:0003674 molecular_function MF
GO:0003824 catalytic activity MF
GO:0005975 carbohydrate metabolic process BP
GO:0005976 polysaccharide metabolic process BP
GO:0008150 biological_process BP
GO:0008152 metabolic process BP
GO:0009056 catabolic process BP
GO:0009057 macromolecule catabolic process BP
GO:0009987 cellular process BP
GO:0010393 galacturonan metabolic process BP
GO:0016052 carbohydrate catabolic process BP
GO:0016787 hydrolase activity MF
GO:0016788 hydrolase activity, acting on ester bonds MF
GO:0017144 xenobiotic metabolic process BP
GO:0030599 pectinesterase activity MF
GO:0042737 xenobiotic catabolic process BP
GO:0043170 macromolecule metabolic process BP
GO:0044237 cellular metabolic process BP
GO:0044238 primary metabolic process BP
GO:0044248 cellular catabolic process BP
GO:0045488 pectin metabolic process BP
GO:0045490 pectin catabolic process BP
GO:0052689 carboxylic ester hydrolase activity MF
GO:0071704 organic substance metabolic process BP
GO:1901575 organic substance catabolic process BP
KEGG Term Name Description
map01100 Metabolic pathways -
map00040 Pentose and glucuronate interconversions -