Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
PITA_47048.g
View in Genome Browser
Position
scaffold169661:25283-29787 (-)
4504bp
Gene Type
gene
Gene Description (Protein Product)
Calcium sensing receptor
Organism
Pinus taeda
Also AS AT5G23060

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
PITA_51420.g Lil3 protein
PITA_50185.g Photosystem I reaction center subunit
PITA_48323.g transcription factor
Regulatory gene
PITA_00010.g Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs)
PITA_00328.g B3 DNA binding domain
PITA_01126.g B3 domain-containing

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0005739 mitochondrion CC
GO:0007275 multicellular organism development BP
GO:0008150 biological_process BP
GO:0009314 response to radiation BP
GO:0009416 response to light stimulus BP
GO:0009507 chloroplast CC
GO:0009534 chloroplast thylakoid CC
GO:0009535 chloroplast thylakoid membrane CC
GO:0009536 plastid CC
GO:0009579 thylakoid CC
GO:0009628 response to abiotic stimulus BP
GO:0009639 response to red or far red light BP
GO:0009640 photomorphogenesis BP
GO:0009704 de-etiolation BP
GO:0009791 post-embryonic development BP
GO:0009987 cellular process BP
GO:0010035 response to inorganic substance BP
GO:0010038 response to metal ion BP
GO:0010119 regulation of stomatal movement BP
GO:0016020 membrane CC
GO:0031976 plastid thylakoid CC
GO:0031984 organelle subcompartment CC
GO:0032501 multicellular organismal process BP
GO:0032502 developmental process BP
GO:0034357 photosynthetic membrane CC
GO:0042221 response to chemical BP
GO:0042651 thylakoid membrane CC
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0044422 obsolete organelle part CC
GO:0044424 obsolete intracellular part CC
GO:0044434 obsolete chloroplast part CC
GO:0044435 obsolete plastid part CC
GO:0044436 obsolete thylakoid part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044446 obsolete intracellular organelle part CC
GO:0044464 obsolete cell part CC
GO:0048856 anatomical structure development BP
GO:0050789 regulation of biological process BP
GO:0050794 regulation of cellular process BP
GO:0050896 response to stimulus BP
GO:0051592 response to calcium ion BP
GO:0051716 cellular response to stimulus BP
GO:0055035 plastid thylakoid membrane CC
GO:0065007 biological regulation BP
GO:0070887 cellular response to chemical stimulus BP
GO:0071241 cellular response to inorganic substance BP
GO:0071248 cellular response to metal ion BP
GO:0071277 cellular response to calcium ion BP
GO:0090333 regulation of stomatal closure BP