PPGR - Gene Detail

Basic Information

Gene ID	gene-LOC118062405 View in Genome Browser
Position	NW_023271098.1:4993-8868 (+) 3875bp
Gene Type	gene
Gene Description (Protein Product)	12-oxophytodienoate reductase
Organism	Populus alba
Also AS	Potri.003G004600AT1G76690Potri.003G004600.v4.1

upstream:

Domain

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Regulation&Interaction

Protein-protein interaction (PPI)

gene-LOC118062990 Ubiquitin exists either covalently attached to another protein, or free (unanchored). When covalently bound, it is conjugated to target proteins via an isopeptide bond either as a monomer (monoubiquitin), a polymer linked via different Lys residues of the ubiquitin (polyubiquitin chains) or a linear polymer linked via the initiator Met of the ubiquitin (linear polyubiquitin chains). Polyubiquitin chains, when attached to a target protein, have different functions depending on the Lys residue of the ubiquitin that is linked

gene-LOC118063087 ubiquitin-60S ribosomal protein

gene-LOC118062405 12-oxophytodienoate reductase

Regulatory gene

gene-LOC118027806 Cyclic dof factor

gene-LOC118027982 B3 DNA binding domain

gene-LOC118027984 B3 DNA binding domain

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Annotation

Orthologous Group

Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

Expression Profile

DataSet	Number of Samples expressed(TPM>1)	Mean	Min	Max	Standard deviation(SD)	Coeffcient variation(CV)

Select Expression

Pathway

GO Term	Description	GO Category
GO:0003674	molecular_function	MF
GO:0003824	catalytic activity	MF
GO:0005575	cellular_component	CC
GO:0005622	intracellular anatomical structure	CC
GO:0005623	obsolete cell	CC
GO:0006950	response to stress	BP
GO:0008150	biological_process	BP
GO:0008152	metabolic process	BP
GO:0009611	response to wounding	BP
GO:0016491	oxidoreductase activity	MF
GO:0016627	oxidoreductase activity, acting on the CH-CH group of donors	MF
GO:0016628	oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor	MF
GO:0016629	12-oxophytodienoate reductase activity	MF
GO:0044464	obsolete cell part	CC
GO:0050896	response to stimulus	BP
GO:0055114	obsolete oxidation-reduction process	BP

KEGG Term	Name	Description
map01110	Biosynthesis of secondary metabolites	-
map01100	Metabolic pathways	-
map00592	alpha-Linolenic acid metabolism	-