Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
gene-LOC118062827
View in Genome Browser
Position
NW_023271825.1:100668-105280 (-)
4612bp
Gene Type
gene
Gene Description (Protein Product)
Protein SUPPRESSOR OF FRI
Organism
Populus alba
Also AS Potri.003G074200AT1G30970Potri.003G074200.v4.1

Gene Structure

upstream:
Get Sequence

Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
gene-LOC118063142 Transcription initiation factor TFIID subunit
gene-LOC118063580 MADS-box protein
gene-LOC118062827 Protein SUPPRESSOR OF FRI
Regulatory gene
gene-LOC118027564 Belongs to the GRAS family
gene-LOC118027565 Myb-like DNA-binding domain
gene-LOC118027806 Cyclic dof factor

Load All Networks

Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0000070 mitotic sister chromatid segregation BP
GO:0000075 cell cycle checkpoint signaling BP
GO:0000226 microtubule cytoskeleton organization BP
GO:0000278 mitotic cell cycle BP
GO:0000280 nuclear division BP
GO:0000775 chromosome, centromeric region CC
GO:0000776 kinetochore CC
GO:0000819 sister chromatid segregation BP
GO:0001578 microtubule bundle formation BP
GO:0003674 molecular_function MF
GO:0003676 nucleic acid binding MF
GO:0003677 DNA binding MF
GO:0003700 DNA-binding transcription factor activity MF
GO:0005488 binding MF
GO:0005515 protein binding MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005634 nucleus CC
GO:0005654 nucleoplasm CC
GO:0005694 chromosome CC
GO:0005730 nucleolus CC
GO:0005856 cytoskeleton CC
GO:0006355 regulation of DNA-templated transcription BP
GO:0006996 organelle organization BP
GO:0007010 cytoskeleton organization BP
GO:0007017 microtubule-based process BP
GO:0007049 cell cycle BP
GO:0007051 spindle organization BP
GO:0007052 mitotic spindle organization BP
GO:0007059 chromosome segregation BP
GO:0007088 regulation of mitotic nuclear division BP
GO:0007093 mitotic cell cycle checkpoint signaling BP
GO:0007094 mitotic spindle assembly checkpoint signaling BP
GO:0007346 regulation of mitotic cell cycle BP
GO:0008017 microtubule binding MF
GO:0008092 cytoskeletal protein binding MF
GO:0008150 biological_process BP
GO:0008270 zinc ion binding MF
GO:0008608 attachment of spindle microtubules to kinetochore BP
GO:0009889 regulation of biosynthetic process BP
GO:0009909 regulation of flower development BP
GO:0009910 negative regulation of flower development BP
GO:0009987 cellular process BP
GO:0010468 regulation of gene expression BP
GO:0010556 regulation of macromolecule biosynthetic process BP
GO:0010564 regulation of cell cycle process BP
GO:0010639 negative regulation of organelle organization BP
GO:0010948 negative regulation of cell cycle process BP
GO:0010965 regulation of mitotic sister chromatid separation BP
GO:0015631 tubulin binding MF
GO:0016043 cellular component organization BP
GO:0019219 regulation of nucleobase-containing compound metabolic process BP
GO:0019222 regulation of metabolic process BP
GO:0022402 cell cycle process BP
GO:0022607 cellular component assembly BP
GO:0030071 regulation of mitotic metaphase/anaphase transition BP
GO:0031109 microtubule polymerization or depolymerization BP
GO:0031323 regulation of cellular metabolic process BP
GO:0031326 regulation of cellular biosynthetic process BP
GO:0031577 spindle checkpoint signaling BP
GO:0031647 regulation of protein stability BP
GO:0031974 membrane-enclosed lumen CC
GO:0031981 nuclear lumen CC
GO:0032991 protein-containing complex CC
GO:0033043 regulation of organelle organization BP
GO:0033044 regulation of chromosome organization BP
GO:0033045 regulation of sister chromatid segregation BP
GO:0033046 negative regulation of sister chromatid segregation BP
GO:0033047 regulation of mitotic sister chromatid segregation BP
GO:0033048 negative regulation of mitotic sister chromatid segregation BP
GO:0034622 protein-containing complex assembly BP
GO:0043167 ion binding MF
GO:0043169 cation binding MF
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043228 non-membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0043232 intracellular non-membrane-bounded organelle CC
GO:0043233 organelle lumen CC
GO:0043933 protein-containing complex organization BP
GO:0044085 cellular component biogenesis BP
GO:0044422 obsolete organelle part CC
GO:0044424 obsolete intracellular part CC
GO:0044427 obsolete chromosomal part CC
GO:0044428 obsolete nuclear part CC
GO:0044430 obsolete cytoskeletal part CC
GO:0044446 obsolete intracellular organelle part CC
GO:0044464 obsolete cell part CC
GO:0045786 negative regulation of cell cycle BP
GO:0045839 negative regulation of mitotic nuclear division BP
GO:0045841 negative regulation of mitotic metaphase/anaphase transition BP
GO:0045930 negative regulation of mitotic cell cycle BP
GO:0046785 microtubule polymerization BP
GO:0046872 metal ion binding MF
GO:0046914 transition metal ion binding MF
GO:0048285 organelle fission BP
GO:0048519 negative regulation of biological process BP
GO:0048523 negative regulation of cellular process BP
GO:0048580 regulation of post-embryonic development BP
GO:0048581 negative regulation of post-embryonic development BP
GO:0048831 regulation of shoot system development BP
GO:0050789 regulation of biological process BP
GO:0050793 regulation of developmental process BP
GO:0050794 regulation of cellular process BP
GO:0050821 protein stabilization BP
GO:0051093 negative regulation of developmental process BP
GO:0051128 regulation of cellular component organization BP
GO:0051129 negative regulation of cellular component organization BP
GO:0051171 regulation of nitrogen compound metabolic process BP
GO:0051225 spindle assembly BP
GO:0051239 regulation of multicellular organismal process BP
GO:0051241 negative regulation of multicellular organismal process BP
GO:0051252 regulation of RNA metabolic process BP
GO:0051258 protein polymerization BP
GO:0051276 chromosome organization BP
GO:0051726 regulation of cell cycle BP
GO:0051783 regulation of nuclear division BP
GO:0051784 negative regulation of nuclear division BP
GO:0051983 regulation of chromosome segregation BP
GO:0051985 negative regulation of chromosome segregation BP
GO:0060255 regulation of macromolecule metabolic process BP
GO:0065003 protein-containing complex assembly BP
GO:0065007 biological regulation BP
GO:0065008 regulation of biological quality BP
GO:0070013 intracellular organelle lumen CC
GO:0070925 organelle assembly BP
GO:0071173 spindle assembly checkpoint signaling BP
GO:0071174 mitotic spindle checkpoint signaling BP
GO:0071840 cellular component organization or biogenesis BP
GO:0080090 regulation of primary metabolic process BP
GO:0090307 mitotic spindle assembly BP
GO:0097159 organic cyclic compound binding MF
GO:0097435 supramolecular fiber organization BP
GO:0098687 chromosomal region CC
GO:0098813 nuclear chromosome segregation BP
GO:0140014 mitotic nuclear division BP
GO:0140110 transcription regulator activity MF
GO:1901363 heterocyclic compound binding MF
GO:1901987 regulation of cell cycle phase transition BP
GO:1901988 negative regulation of cell cycle phase transition BP
GO:1901990 regulation of mitotic cell cycle phase transition BP
GO:1901991 negative regulation of mitotic cell cycle phase transition BP
GO:1902099 regulation of metaphase/anaphase transition of cell cycle BP
GO:1902100 negative regulation of metaphase/anaphase transition of cell cycle BP
GO:1902850 microtubule cytoskeleton organization involved in mitosis BP
GO:1903047 mitotic cell cycle process BP
GO:1903506 regulation of nucleic acid-templated transcription BP
GO:1905818 regulation of chromosome separation BP
GO:1905819 negative regulation of chromosome separation BP
GO:1990047 spindle matrix CC
GO:2000026 regulation of multicellular organismal development BP
GO:2000112 regulation of cellular macromolecule biosynthetic process BP
GO:2000241 regulation of reproductive process BP
GO:2000242 negative regulation of reproductive process BP
GO:2000816 negative regulation of mitotic sister chromatid separation BP
GO:2001141 regulation of RNA biosynthetic process BP
GO:2001251 negative regulation of chromosome organization BP