Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
gene-H0E87_000223
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Position
CM027582.1:7070617-7071651 (+)
1034bp
Gene Type
gene
Gene Description (Protein Product)
zinc finger CCCH domain-containing protein
Organism
Populus deltoides
Also AS Podel.13G006200AT5G26749Potri.013G004801.v4.1

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
gene-H0E87_000906 F-box LRR-repeat protein 3-like
gene-H0E87_030056 SART-1 family
gene-H0E87_026390 U4 U6.U5 tri-snRNP-associated protein
Regulatory gene
gene-H0E87_001144 Cyclic dof factor
gene-H0E87_001654 GAGA binding protein-like family
gene-H0E87_001697 GAGA binding protein-like family
Target gene
gene-H0E87_001189 Myb-related protein
gene-H0E87_003021 Belongs to the UDP-glycosyltransferase family
gene-H0E87_003473 Nuclear transcription factor Y subunit

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005634 nucleus CC
GO:0005681 spliceosomal complex CC
GO:0005689 U12-type spliceosomal complex CC
GO:0032991 protein-containing complex CC
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0044422 obsolete organelle part CC
GO:0044424 obsolete intracellular part CC
GO:0044428 obsolete nuclear part CC
GO:0044446 obsolete intracellular organelle part CC
GO:0044464 obsolete cell part CC
GO:1990904 ribonucleoprotein complex CC