Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
gene-H0E87_019845
View in Genome Browser
Position
CM027581.1:10086578-10087400 (-)
822bp
Gene Type
gene
Gene Description (Protein Product)
ATP-dependent DNA helicase
Organism
Populus deltoides
Also AS Podel.12G121700AT4G25120Potri.012G114100.v4.1

Gene Structure

upstream:
Get Sequence

Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
gene-H0E87_029294 ATP-dependent DNA helicase Q-like
gene-H0E87_029033 ATP-dependent DNA helicase Q-like
gene-H0E87_028973 Belongs to the helicase family. RecQ subfamily
Regulatory gene
gene-H0E87_000060 zinc finger CCCH domain-containing protein
gene-H0E87_000097 Zinc finger protein
gene-H0E87_000223 zinc finger CCCH domain-containing protein

Load All Networks

Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0003674 molecular_function MF
GO:0003678 DNA helicase activity MF
GO:0003824 catalytic activity MF
GO:0004386 helicase activity MF
GO:0006139 nucleobase-containing compound metabolic process BP
GO:0006259 DNA metabolic process BP
GO:0006310 DNA recombination BP
GO:0006725 cellular aromatic compound metabolic process BP
GO:0006807 nitrogen compound metabolic process BP
GO:0006996 organelle organization BP
GO:0008150 biological_process BP
GO:0008152 metabolic process BP
GO:0009987 cellular process BP
GO:0016043 cellular component organization BP
GO:0016462 pyrophosphatase activity MF
GO:0016787 hydrolase activity MF
GO:0016817 hydrolase activity, acting on acid anhydrides MF
GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides MF
GO:0017111 ribonucleoside triphosphate phosphatase activity MF
GO:0032392 DNA geometric change BP
GO:0032508 DNA duplex unwinding BP
GO:0034641 cellular nitrogen compound metabolic process BP
GO:0036292 DNA rewinding BP
GO:0043138 3'-5' DNA helicase activity MF
GO:0043170 macromolecule metabolic process BP
GO:0044237 cellular metabolic process BP
GO:0044238 primary metabolic process BP
GO:0044260 cellular macromolecule metabolic process BP
GO:0046483 heterocycle metabolic process BP
GO:0051276 chromosome organization BP
GO:0071103 DNA conformation change BP
GO:0071704 organic substance metabolic process BP
GO:0071840 cellular component organization or biogenesis BP
GO:0090304 nucleic acid metabolic process BP
GO:0140097 catalytic activity, acting on DNA MF
GO:1901360 organic cyclic compound metabolic process BP