Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
gene-H0E87_021056
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Position
CM027577.1:10879218-10882695 (-)
3477bp
Gene Type
gene
Gene Description (Protein Product)
2OG-Fe(II) oxygenase superfamily
Organism
Populus deltoides
Also AS Podel.08G160200AT1G68080Potri.008G139000.v4.1

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
gene-H0E87_028904 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
gene-H0E87_024765 Ubiquitin carboxyl-terminal hydrolase
gene-H0E87_031475 Tubulin is the major constituent of microtubules. The gamma chain is found at microtubule organizing centers (MTOC) such as the spindle poles or the centrosome
Regulatory gene
gene-H0E87_000060 zinc finger CCCH domain-containing protein
gene-H0E87_000145 NAC domain-containing protein
gene-H0E87_000223 zinc finger CCCH domain-containing protein

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0003674 molecular_function MF
GO:0003824 catalytic activity MF
GO:0005488 binding MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0005783 endoplasmic reticulum CC
GO:0006457 protein folding BP
GO:0006464 protein modification process BP
GO:0006807 nitrogen compound metabolic process BP
GO:0008150 biological_process BP
GO:0008152 metabolic process BP
GO:0009987 cellular process BP
GO:0012505 endomembrane system CC
GO:0016491 oxidoreductase activity MF
GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen MF
GO:0016706 2-oxoglutarate-dependent dioxygenase activity MF
GO:0018126 protein hydroxylation BP
GO:0018193 peptidyl-amino acid modification BP
GO:0018208 peptidyl-proline modification BP
GO:0019511 peptidyl-proline hydroxylation BP
GO:0019538 protein metabolic process BP
GO:0019797 procollagen-proline 3-dioxygenase activity MF
GO:0019798 procollagen-proline dioxygenase activity MF
GO:0031543 peptidyl-proline dioxygenase activity MF
GO:0031544 peptidyl-proline 3-dioxygenase activity MF
GO:0032963 collagen metabolic process BP
GO:0032991 protein-containing complex CC
GO:0036211 protein modification process BP
GO:0043170 macromolecule metabolic process BP
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0043412 macromolecule modification BP
GO:0044237 cellular metabolic process BP
GO:0044238 primary metabolic process BP
GO:0044260 cellular macromolecule metabolic process BP
GO:0044267 protein metabolic process BP
GO:0044424 obsolete intracellular part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044464 obsolete cell part CC
GO:0044877 protein-containing complex binding MF
GO:0051213 dioxygenase activity MF
GO:0055114 obsolete oxidation-reduction process BP
GO:0061077 chaperone-mediated protein folding BP
GO:0071704 organic substance metabolic process BP
GO:0140096 catalytic activity, acting on a protein MF
GO:1901564 organonitrogen compound metabolic process BP