Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
gene-H0E87_027199
View in Genome Browser
Position
CM027570.1:51985781-51988823 (-)
3042bp
Gene Type
gene
Gene Description (Protein Product)
"Omega-6 fatty acid desaturase
Organism
Populus deltoides
Also AS Podel.01G014000AT3G12120Potri.001G012401.v4.1

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
gene-H0E87_027199 Omega-6 fatty acid desaturase, endoplasmic reticulum isozyme
gene-H0E87_029341 Phospholipid diacylglycerol acyltransferase
gene-H0E87_030799 Acyltransferase
Regulatory gene
gene-H0E87_001144 Cyclic dof factor
gene-H0E87_001654 GAGA binding protein-like family
gene-H0E87_001697 GAGA binding protein-like family

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway KEGG Pathway
GO Term Description GO Category
GO:0003674 molecular_function MF
GO:0003824 catalytic activity MF
GO:0004497 monooxygenase activity MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0005783 endoplasmic reticulum CC
GO:0005789 endoplasmic reticulum membrane CC
GO:0008150 biological_process BP
GO:0008152 metabolic process BP
GO:0012505 endomembrane system CC
GO:0016020 membrane CC
GO:0016021 membrane CC
GO:0016491 oxidoreductase activity MF
GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen MF
GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen MF
GO:0030176 obsolete integral component of endoplasmic reticulum membrane CC
GO:0031224 obsolete intrinsic component of membrane CC
GO:0031227 obsolete intrinsic component of endoplasmic reticulum membrane CC
GO:0031984 organelle subcompartment CC
GO:0042175 nuclear outer membrane-endoplasmic reticulum membrane network CC
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0044422 obsolete organelle part CC
GO:0044424 obsolete intracellular part CC
GO:0044425 obsolete membrane part CC
GO:0044432 obsolete endoplasmic reticulum part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044446 obsolete intracellular organelle part CC
GO:0044464 obsolete cell part CC
GO:0050183 phosphatidylcholine 12-monooxygenase activity MF
GO:0055114 obsolete oxidation-reduction process BP
GO:0098827 endoplasmic reticulum subcompartment CC
KEGG Term Name Description
map01100 Metabolic pathways -
map01040 Biosynthesis of unsaturated fatty acids -