Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
gene-H0E87_031195
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Position
CM027583.1:5918350-5921965 (+)
3615bp
Gene Type
gene
Gene Description (Protein Product)
tRNA-specific adenosine deaminase
Organism
Populus deltoides
Also AS Podel.14G082900AT1G01760Potri.014G081400.v4.1

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
gene-H0E87_031195 tRNA-specific adenosine deaminase
gene-H0E87_031775 Adenylate isopentenyltransferase 3
gene-H0E87_031968 Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family
Regulatory gene
gene-H0E87_000273 B3 domain-containing
gene-H0E87_001144 Cyclic dof factor
gene-H0E87_001430 B3 DNA binding domain

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0003674 molecular_function MF
GO:0003676 nucleic acid binding MF
GO:0003723 RNA binding MF
GO:0003824 catalytic activity MF
GO:0004000 adenosine deaminase activity MF
GO:0005488 binding MF
GO:0006139 nucleobase-containing compound metabolic process BP
GO:0006396 RNA processing BP
GO:0006399 tRNA metabolic process BP
GO:0006725 cellular aromatic compound metabolic process BP
GO:0006807 nitrogen compound metabolic process BP
GO:0008033 tRNA processing BP
GO:0008150 biological_process BP
GO:0008152 metabolic process BP
GO:0008251 tRNA-specific adenosine deaminase activity MF
GO:0009987 cellular process BP
GO:0010467 gene expression BP
GO:0016070 RNA metabolic process BP
GO:0016787 hydrolase activity MF
GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds MF
GO:0016814 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines MF
GO:0019239 deaminase activity MF
GO:0034470 ncRNA processing BP
GO:0034641 cellular nitrogen compound metabolic process BP
GO:0034660 ncRNA metabolic process BP
GO:0043170 macromolecule metabolic process BP
GO:0044237 cellular metabolic process BP
GO:0044238 primary metabolic process BP
GO:0046483 heterocycle metabolic process BP
GO:0071704 organic substance metabolic process BP
GO:0090304 nucleic acid metabolic process BP
GO:0097159 organic cyclic compound binding MF
GO:1901360 organic cyclic compound metabolic process BP
GO:1901363 heterocyclic compound binding MF