Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
gene-H0E87_031770
View in Genome Browser
Position
CM027583.1:9807760-9820862 (-)
13102bp
Gene Type
gene
Gene Description (Protein Product)
Holliday junction DNA helicase ruvB N-terminus
Organism
Populus deltoides
Also AS Podel.14G137600AT1G02890Potri.014G131000.v4.1

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
gene-H0E87_031944 HSA
gene-H0E87_032008 ubiquitin-40S ribosomal protein
Regulatory gene
gene-H0E87_001144 Cyclic dof factor
gene-H0E87_001635 MADS-box transcription factor
gene-H0E87_001832 Dof zinc finger protein

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0002090 regulation of receptor internalization BP
GO:0002092 positive regulation of receptor internalization BP
GO:0003008 system process BP
GO:0003674 molecular_function MF
GO:0003824 catalytic activity MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005634 nucleus CC
GO:0005886 plasma membrane CC
GO:0007610 behavior BP
GO:0007611 learning or memory BP
GO:0007612 learning BP
GO:0007613 memory BP
GO:0008150 biological_process BP
GO:0009893 positive regulation of metabolic process BP
GO:0010604 positive regulation of macromolecule metabolic process BP
GO:0010646 regulation of cell communication BP
GO:0010648 negative regulation of cell communication BP
GO:0016020 membrane CC
GO:0016462 pyrophosphatase activity MF
GO:0016787 hydrolase activity MF
GO:0016817 hydrolase activity, acting on acid anhydrides MF
GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides MF
GO:0016887 ATP hydrolysis activity MF
GO:0017111 ribonucleoside triphosphate phosphatase activity MF
GO:0019222 regulation of metabolic process BP
GO:0023051 regulation of signaling BP
GO:0023057 negative regulation of signaling BP
GO:0030100 regulation of endocytosis BP
GO:0031323 regulation of cellular metabolic process BP
GO:0031325 positive regulation of cellular metabolic process BP
GO:0032501 multicellular organismal process BP
GO:0032879 regulation of localization BP
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0044424 obsolete intracellular part CC
GO:0044425 obsolete membrane part CC
GO:0044456 obsolete synapse part CC
GO:0044459 obsolete plasma membrane part CC
GO:0044464 obsolete cell part CC
GO:0045202 synapse CC
GO:0045211 postsynaptic membrane CC
GO:0045807 positive regulation of endocytosis BP
GO:0048259 regulation of receptor-mediated endocytosis BP
GO:0048260 positive regulation of receptor-mediated endocytosis BP
GO:0048518 positive regulation of biological process BP
GO:0048519 negative regulation of biological process BP
GO:0048522 positive regulation of cellular process BP
GO:0048523 negative regulation of cellular process BP
GO:0050789 regulation of biological process BP
GO:0050794 regulation of cellular process BP
GO:0050804 modulation of chemical synaptic transmission BP
GO:0050805 negative regulation of synaptic transmission BP
GO:0050877 nervous system process BP
GO:0050890 cognition BP
GO:0051049 regulation of transport BP
GO:0051050 positive regulation of transport BP
GO:0051128 regulation of cellular component organization BP
GO:0051130 positive regulation of cellular component organization BP
GO:0051966 regulation of synaptic transmission, glutamatergic BP
GO:0051967 negative regulation of synaptic transmission, glutamatergic BP
GO:0060255 regulation of macromolecule metabolic process BP
GO:0060627 regulation of vesicle-mediated transport BP
GO:0065007 biological regulation BP
GO:0071944 cell periphery CC
GO:0097060 synaptic membrane CC
GO:0098590 plasma membrane region CC
GO:0098794 postsynapse CC
GO:0099177 regulation of trans-synaptic signaling BP