PPGR - Gene Detail

Basic Information

Gene ID	gene-LOC105142211 View in Genome Browser
Position	NW_011500027.1:14384-20104 (+) 5720bp
Gene Type	gene
Gene Description (Protein Product)	galactinol--sucrose galactosyltransferase
Organism	Populus euphratica
Also AS	Potri.006G052800AT3G57520Potri.006G052800.v4.1

upstream:

Domain

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Regulation&Interaction

Protein-protein interaction (PPI)

gene-LOC105142396 Ubiquitin exists either covalently attached to another protein, or free (unanchored). When covalently bound, it is conjugated to target proteins via an isopeptide bond either as a monomer (monoubiquitin), a polymer linked via different Lys residues of the ubiquitin (polyubiquitin chains) or a linear polymer linked via the initiator Met of the ubiquitin (linear polyubiquitin chains). Polyubiquitin chains, when attached to a target protein, have different functions depending on the Lys residue of the ubiquitin that is linked

gene-LOC105142577 Ubiquitin exists either covalently attached to another protein, or free (unanchored). When covalently bound, it is conjugated to target proteins via an isopeptide bond either as a monomer (monoubiquitin), a polymer linked via different Lys residues of the ubiquitin (polyubiquitin chains) or a linear polymer linked via the initiator Met of the ubiquitin (linear polyubiquitin chains). Polyubiquitin chains, when attached to a target protein, have different functions depending on the Lys residue of the ubiquitin that is linked

gene-LOC105142211

Regulatory gene

gene-LOC105107464 B3 domain-containing transcription factor

gene-LOC105107656 ZINC FINGER protein

gene-LOC105107871 B3 domain-containing protein Os01g0234100-like

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Annotation

Orthologous Group

Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

Expression Profile

DataSet	Number of Samples expressed(TPM>1)	Mean	Min	Max	Standard deviation(SD)	Coeffcient variation(CV)

Select Expression

Pathway

GO Term	Description	GO Category
GO:0003674	molecular_function	MF
GO:0003824	catalytic activity	MF
GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	MF
GO:0004557	alpha-galactosidase activity	MF
GO:0005575	cellular_component	CC
GO:0005911	cell-cell junction	CC
GO:0005975	carbohydrate metabolic process	BP
GO:0006950	response to stress	BP
GO:0006979	response to oxidative stress	BP
GO:0008150	biological_process	BP
GO:0008152	metabolic process	BP
GO:0009056	catabolic process	BP
GO:0009311	oligosaccharide metabolic process	BP
GO:0009313	oligosaccharide catabolic process	BP
GO:0009506	plasmodesma	CC
GO:0009628	response to abiotic stimulus	BP
GO:0015925	galactosidase activity	MF
GO:0016052	carbohydrate catabolic process	BP
GO:0016787	hydrolase activity	MF
GO:0016798	hydrolase activity, acting on glycosyl bonds	MF
GO:0030054	cell junction	CC
GO:0033530	raffinose metabolic process	BP
GO:0034484	raffinose catabolic process	BP
GO:0044238	primary metabolic process	BP
GO:0050896	response to stimulus	BP
GO:0052692	raffinose alpha-galactosidase activity	MF
GO:0055044	symplast	CC
GO:0071704	organic substance metabolic process	BP
GO:0080167	response to karrikin	BP
GO:1901575	organic substance catabolic process	BP

KEGG Term	Name	Description
map01100	Metabolic pathways	-
map00052	Galactose metabolism	-