Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Pathway
Basic Information
Gene ID
Potra2n17c31709
View in Genome Browser
Position
chr17:13594954-13597327 (-)
2373bp
Gene Type
gene
Gene Description (Protein Product)
Belongs to the peroxidase family. Classical plant (class III) peroxidase subfamily
Organism
Populus tremula
Also AS Potri.017G037900AT1G05260Potri.017G037900.v4.1

Gene Structure

upstream:
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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
Potra2n19c33852 Belongs to the oxygen-dependent FAD-linked oxidoreductase family
Potra2n1c2619 Cinnamyl alcohol dehydrogenase
Potra2n7c16360 Belongs to the UDP-glycosyltransferase family
Regulatory gene
Potra2n10c20185 -
Potra2n10c20306 Trihelix transcription factor
Potra2n10c20324 Amino acid kinase family

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail


Pathway
Go Pathway KEGG Pathway
GO Term Description GO Category
GO:0001101 response to acid chemical BP
GO:0003674 molecular_function MF
GO:0003824 catalytic activity MF
GO:0004601 peroxidase activity MF
GO:0005575 cellular_component CC
GO:0005618 cell wall CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005634 nucleus CC
GO:0005737 cytoplasm CC
GO:0005783 endoplasmic reticulum CC
GO:0005911 cell-cell junction CC
GO:0006950 response to stress BP
GO:0006970 response to osmotic stress BP
GO:0006972 hyperosmotic response BP
GO:0008150 biological_process BP
GO:0008152 metabolic process BP
GO:0009266 response to temperature stimulus BP
GO:0009269 response to desiccation BP
GO:0009409 response to cold BP
GO:0009414 response to water deprivation BP
GO:0009415 response to water BP
GO:0009505 plant-type cell wall CC
GO:0009506 plasmodesma CC
GO:0009628 response to abiotic stimulus BP
GO:0009636 response to toxic substance BP
GO:0009651 response to salt stress BP
GO:0009664 plant-type cell wall organization BP
GO:0009987 cellular process BP
GO:0010035 response to inorganic substance BP
GO:0012505 endomembrane system CC
GO:0016043 cellular component organization BP
GO:0016209 antioxidant activity MF
GO:0016491 oxidoreductase activity MF
GO:0016684 oxidoreductase activity, acting on peroxide as acceptor MF
GO:0030054 cell junction CC
GO:0030312 external encapsulating structure CC
GO:0042221 response to chemical BP
GO:0042538 hyperosmotic salinity response BP
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0044424 obsolete intracellular part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044464 obsolete cell part CC
GO:0045229 external encapsulating structure organization BP
GO:0050896 response to stimulus BP
GO:0051716 cellular response to stimulus BP
GO:0055044 symplast CC
GO:0055114 obsolete oxidation-reduction process BP
GO:0070887 cellular response to chemical stimulus BP
GO:0071554 cell wall organization or biogenesis BP
GO:0071555 cell wall organization BP
GO:0071669 plant-type cell wall organization or biogenesis BP
GO:0071840 cellular component organization or biogenesis BP
GO:0071944 cell periphery CC
GO:0097237 cellular response to toxic substance BP
GO:0098754 detoxification BP
GO:0098869 cellular oxidant detoxification BP
GO:1901700 response to oxygen-containing compound BP
GO:1990748 cellular detoxification BP
KEGG Term Name Description
map01110 Biosynthesis of secondary metabolites -
map01100 Metabolic pathways -
map00940 Phenylpropanoid biosynthesis Phenylpropanoids are a group of plant secondary metabolites derived from phenylalanine and having a wide variety of functions both as structural and signaling molecules. Phenylalanine is first converted to cinnamic acid by deamination. It is followed by hydroxylation and frequent methylation to generate coumaric acid and other acids with a phenylpropane (C6-C3) unit. Reduction of the CoA-activated carboxyl groups of these acids results in the corresponding aldehydes and alcohols. The alcohols are called monolignols, the starting compounds for biosynthesis of lignin.