PPGR - Gene Detail

Basic Information

Gene Structure

Domain

Regulation&
Interaction

Annotation

Orthologus Group

Pathway

Basic Information

Gene ID	Potra2n241s35081 View in Genome Browser
Position	scaffold241:53902-57864 (+) 3962bp
Gene Type	gene
Gene Description (Protein Product)	Structural maintenance of chromosomes protein
Organism	Populus tremula
Also AS	Potri.009G155200AT2G27170Potri.009G155200.v4.1

upstream:

Domain

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Regulation&Interaction

Protein-protein interaction (PPI)

Potra2n2c4355 cohesion protein

Potra2n8c17266 Sister chromatid cohesion 1 protein

Potra2n5c10835 Structural maintenance of chromosomes protein

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Annotation

Orthologous Group

Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

Pathway

GO Term	Description	GO Category
GO:0000785	chromatin	CC
GO:0000793	condensed chromosome	CC
GO:0000819	sister chromatid segregation	BP
GO:0003674	molecular_function	MF
GO:0003682	chromatin binding	MF
GO:0003824	catalytic activity	MF
GO:0004672	protein kinase activity	MF
GO:0004674	protein serine/threonine kinase activity	MF
GO:0005488	binding	MF
GO:0005515	protein binding	MF
GO:0005575	cellular_component	CC
GO:0005622	intracellular anatomical structure	CC
GO:0005623	obsolete cell	CC
GO:0005634	nucleus	CC
GO:0005694	chromosome	CC
GO:0005737	cytoplasm	CC
GO:0005819	spindle	CC
GO:0005856	cytoskeleton	CC
GO:0005911	cell-cell junction	CC
GO:0006464	protein modification process	BP
GO:0006468	protein phosphorylation	BP
GO:0006793	phosphorus metabolic process	BP
GO:0006796	phosphate-containing compound metabolic process	BP
GO:0006807	nitrogen compound metabolic process	BP
GO:0006996	organelle organization	BP
GO:0007049	cell cycle	BP
GO:0007059	chromosome segregation	BP
GO:0007062	sister chromatid cohesion	BP
GO:0008150	biological_process	BP
GO:0008152	metabolic process	BP
GO:0008278	cohesin complex	CC
GO:0009506	plasmodesma	CC
GO:0009507	chloroplast	CC
GO:0009536	plastid	CC
GO:0009987	cellular process	BP
GO:0010468	regulation of gene expression	BP
GO:0015630	microtubule cytoskeleton	CC
GO:0016043	cellular component organization	BP
GO:0016301	kinase activity	MF
GO:0016310	phosphorylation	BP
GO:0016363	nuclear matrix	CC
GO:0016740	transferase activity	MF
GO:0016772	transferase activity, transferring phosphorus-containing groups	MF
GO:0016773	phosphotransferase activity, alcohol group as acceptor	MF
GO:0019222	regulation of metabolic process	BP
GO:0019538	protein metabolic process	BP
GO:0022402	cell cycle process	BP
GO:0030054	cell junction	CC
GO:0031974	membrane-enclosed lumen	CC
GO:0031981	nuclear lumen	CC
GO:0032991	protein-containing complex	CC
GO:0034399	nuclear periphery	CC
GO:0036211	protein modification process	BP
GO:0042802	identical protein binding	MF
GO:0043170	macromolecule metabolic process	BP
GO:0043226	organelle	CC
GO:0043227	membrane-bounded organelle	CC
GO:0043228	non-membrane-bounded organelle	CC
GO:0043229	intracellular organelle	CC
GO:0043231	intracellular membrane-bounded organelle	CC
GO:0043232	intracellular non-membrane-bounded organelle	CC
GO:0043233	organelle lumen	CC
GO:0043412	macromolecule modification	BP
GO:0044237	cellular metabolic process	BP
GO:0044238	primary metabolic process	BP
GO:0044260	cellular macromolecule metabolic process	BP
GO:0044267	protein metabolic process	BP
GO:0044422	obsolete organelle part	CC
GO:0044424	obsolete intracellular part	CC
GO:0044427	obsolete chromosomal part	CC
GO:0044428	obsolete nuclear part	CC
GO:0044430	obsolete cytoskeletal part	CC
GO:0044444	obsolete cytoplasmic part	CC
GO:0044446	obsolete intracellular organelle part	CC
GO:0044464	obsolete cell part	CC
GO:0050789	regulation of biological process	BP
GO:0050794	regulation of cellular process	BP
GO:0051276	chromosome organization	BP
GO:0055044	symplast	CC
GO:0060147	regulation of post-transcriptional gene silencing	BP
GO:0060255	regulation of macromolecule metabolic process	BP
GO:0060966	regulation of gene silencing by RNA	BP
GO:0060968	obsolete regulation of gene silencing	BP
GO:0065007	biological regulation	BP
GO:0070013	intracellular organelle lumen	CC
GO:0071704	organic substance metabolic process	BP
GO:0071840	cellular component organization or biogenesis	BP
GO:0098813	nuclear chromosome segregation	BP
GO:0140096	catalytic activity, acting on a protein	MF
GO:1900368	regulation of post-transcriptional gene silencing by RNA	BP
GO:1901564	organonitrogen compound metabolic process	BP