Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Pathway
Basic Information
Gene ID
Potra2n6c13871
View in Genome Browser
Position
chr6:9595758-9598212 (-)
2454bp
Gene Type
gene
Gene Description (Protein Product)
nifU-like protein
Organism
Populus tremula
Also AS Potri.006G165600AT4G25910Potri.006G165600.v4.1

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
Potra2n8c17214 zinc metalloprotease EGY2, chloroplastic
Potra2n9c18881 Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged tRNA(Ala) via its editing domain
Potra2n6c13871 nifU-like protein

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail


Pathway
Go Pathway
GO Term Description GO Category
GO:0003674 molecular_function MF
GO:0005198 structural molecule activity MF
GO:0005488 binding MF
GO:0005515 protein binding MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0006091 generation of precursor metabolites and energy BP
GO:0008150 biological_process BP
GO:0008152 metabolic process BP
GO:0009507 chloroplast CC
GO:0009532 plastid stroma CC
GO:0009536 plastid CC
GO:0009570 chloroplast stroma CC
GO:0009987 cellular process BP
GO:0015979 photosynthesis BP
GO:0016043 cellular component organization BP
GO:0019684 photosynthesis, light reaction BP
GO:0022607 cellular component assembly BP
GO:0032947 molecular adaptor activity MF
GO:0034622 protein-containing complex assembly BP
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0043933 protein-containing complex organization BP
GO:0044085 cellular component biogenesis BP
GO:0044237 cellular metabolic process BP
GO:0044422 obsolete organelle part CC
GO:0044424 obsolete intracellular part CC
GO:0044434 obsolete chloroplast part CC
GO:0044435 obsolete plastid part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044446 obsolete intracellular organelle part CC
GO:0044464 obsolete cell part CC
GO:0048564 photosystem I assembly BP
GO:0065003 protein-containing complex assembly BP
GO:0071840 cellular component organization or biogenesis BP