Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Pathway
Basic Information
Gene ID
Potra2n9c18989
View in Genome Browser
Position
chr9:2514413-2521491 (-)
7078bp
Gene Type
gene
Gene Description (Protein Product)
Belongs to the chalcone stilbene synthases family
5'-methylthioadenosine S-adenosylhomocysteine nucleosidase
Organism
Populus tremula
Also AS Potri.009G128800Potri.009G128700AT4G34850AT4G38800Potri.009G128800.v4.1

Gene Structure

upstream:
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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
Potra2n9c19288 Methylthioribose kinase-like
Potra2n9c19288
Potra2n9c18989 Belongs to the chalcone stilbene synthases family

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail


Pathway
Go Pathway KEGG Pathway
GO Term Description GO Category
GO:0003674 molecular_function MF
GO:0003824 catalytic activity MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0005783 endoplasmic reticulum CC
GO:0006725 cellular aromatic compound metabolic process BP
GO:0007275 multicellular organism development BP
GO:0008150 biological_process BP
GO:0008152 metabolic process BP
GO:0009058 biosynthetic process BP
GO:0009555 pollen development BP
GO:0009653 anatomical structure morphogenesis BP
GO:0009987 cellular process BP
GO:0010208 pollen wall assembly BP
GO:0010584 pollen exine formation BP
GO:0010927 cellular component assembly involved in morphogenesis BP
GO:0012505 endomembrane system CC
GO:0016043 cellular component organization BP
GO:0016740 transferase activity MF
GO:0016746 acyltransferase activity MF
GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups MF
GO:0019438 aromatic compound biosynthetic process BP
GO:0019748 secondary metabolic process BP
GO:0022607 cellular component assembly BP
GO:0030198 extracellular matrix organization BP
GO:0030638 polyketide metabolic process BP
GO:0030639 polyketide biosynthetic process BP
GO:0032501 multicellular organismal process BP
GO:0032502 developmental process BP
GO:0032989 cellular component morphogenesis BP
GO:0043062 extracellular structure organization BP
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0044085 cellular component biogenesis BP
GO:0044237 cellular metabolic process BP
GO:0044249 cellular biosynthetic process BP
GO:0044424 obsolete intracellular part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044464 obsolete cell part CC
GO:0044550 secondary metabolite biosynthetic process BP
GO:0045229 external encapsulating structure organization BP
GO:0048229 gametophyte development BP
GO:0048646 anatomical structure formation involved in morphogenesis BP
GO:0048856 anatomical structure development BP
GO:0048869 cellular developmental process BP
GO:0071704 organic substance metabolic process BP
GO:0071840 cellular component organization or biogenesis BP
GO:0080110 sporopollenin biosynthetic process BP
GO:0085029 extracellular matrix assembly BP
GO:0090439 tetraketide alpha-pyrone synthase activity MF
GO:1901576 organic substance biosynthetic process BP
GO:0000003 reproduction BP
GO:0000096 sulfur amino acid metabolic process BP
GO:0000097 sulfur amino acid biosynthetic process BP
GO:0006082 organic acid metabolic process BP
GO:0006520 amino acid metabolic process BP
GO:0006555 methionine metabolic process BP
GO:0006790 sulfur compound metabolic process BP
GO:0006807 nitrogen compound metabolic process BP
GO:0008477 purine nucleosidase activity MF
GO:0008652 amino acid biosynthetic process BP
GO:0008930 methylthioadenosine nucleosidase activity MF
GO:0009066 aspartate family amino acid metabolic process BP
GO:0009067 aspartate family amino acid biosynthetic process BP
GO:0009086 methionine biosynthetic process BP
GO:0009888 tissue development BP
GO:0010087 phloem or xylem histogenesis BP
GO:0016053 organic acid biosynthetic process BP
GO:0016787 hydrolase activity MF
GO:0016798 hydrolase activity, acting on glycosyl bonds MF
GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds MF
GO:0017144 xenobiotic metabolic process BP
GO:0019509 L-methionine salvage from methylthioadenosine BP
GO:0019752 carboxylic acid metabolic process BP
GO:0043094 cellular metabolic compound salvage BP
GO:0043102 amino acid salvage BP
GO:0043436 oxoacid metabolic process BP
GO:0044238 primary metabolic process BP
GO:0044272 sulfur compound biosynthetic process BP
GO:0044281 small molecule metabolic process BP
GO:0044283 small molecule biosynthetic process BP
GO:0046394 carboxylic acid biosynthetic process BP
GO:0071265 L-methionine biosynthetic process BP
GO:0071267 L-methionine salvage BP
GO:1901564 organonitrogen compound metabolic process BP
GO:1901566 organonitrogen compound biosynthetic process BP
GO:1901605 alpha-amino acid metabolic process BP
GO:1901607 alpha-amino acid biosynthetic process BP
KEGG Term Name Description
map01100 Metabolic pathways -
map00270 Cysteine and methionine metabolism Cysteine and methionine are sulfur-containing amino acids. Cysteine is synthesized from serine through different pathways in different organism groups. In bacteria and plants, cysteine is converted from serine (via acetylserine) by transfer of hydrogen sulfide [MD:M00021]. In animals, methionine-derived homocysteine is used as sulfur source and its condensation product with serine (cystathionine) is converted to cysteine [MD:M00338]. Cysteine is metabolized to pyruvate in multiple routes. Methionine is an essential amino acid, which animals cannot synthesize. In bacteria and plants, methionine is synthesized from aspartate [MD:M00017]. S-Adenosylmethionine (SAM), synthesized from methionine and ATP, is a methyl group donor in many important transfer reactions including DNA methylation for regulation of gene expression. SAM may also be used to regenerate methionine in the methionine salvage pathway [MD:M00034].