Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
Potrx002416g00010
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Position
Potrx002416:3867-5493 (-)
1626bp
Gene Type
gene
Gene Description (Protein Product)
"RuBisCO catalyzes two reactions the carboxylation of D- ribulose 1
Organism
Populus tremula x Populus tremuloides
Also AS Potri.017G114600AT1G67090Potri.017G114600.v4.1

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
Potrx008297g00030 Belongs to the phosphoglycerate kinase family
Potrx065290g00030 Phosphoglycolate phosphatase
Potrx050708g00020 Phosphoglycolate phosphatase
Regulatory gene
Potrx000259g00020 B3 domain-containing transcription factor
Potrx000278g00040 SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains
Potrx000718g00010 B3 DNA binding domain

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway KEGG Pathway
GO Term Description GO Category
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0009507 chloroplast CC
GO:0009536 plastid CC
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0044424 obsolete intracellular part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044464 obsolete cell part CC
KEGG Term Name Description
map01110 Biosynthesis of secondary metabolites -
map01100 Metabolic pathways -
map00710 Carbon fixation in photosynthetic organisms -
map00630 Glyoxylate and dicarboxylate metabolism -