Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Basic Information
Gene ID
Potrx003429g00020
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Position
Potrx003429:11627-12283 (+)
656bp
Gene Type
gene
Gene Description (Protein Product)
LOB domain-containing protein
Organism
Populus tremula x Populus tremuloides
Also AS Potri.008G079800AT1G65620Potri.008G079800.v4.1

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
Potrx008737g00010 LOB domain-containing protein
Potrx057988g00010 LOB domain-containing protein
Potrx063298g00020 Polycomb group protein
Regulatory gene
Potrx002235g00010 Protein BASIC PENTACYSTEINE2-like
Potrx002424g00040 Protein BASIC PENTACYSTEINE4-like
Potrx003399g00030 GAGA binding protein-like family
Target gene
Potrx000326g00020 transcription factor
Potrx000416g00030 SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains
Potrx000460g00010 Specifically methylates the N1 position of guanosine-37 in various cytoplasmic and mitochondrial tRNAs. Methylation is not dependent on the nature of the nucleoside 5' of the target nucleoside. This is the first step in the biosynthesis of wybutosine (yW), a modified base adjacent to the anticodon of tRNAs and required for accurate decoding

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)