Basic Information
Gene ID
Potrx051291g00010
Position
Potrx051291:3-1703 (-)
1700bp
Gene Type
gene
Gene Description (Protein Product)
cell division cycle protein 48
Organism
Also AS Potri.017G108200AT3G09840Potri.017G108200.v4.1

Gene Structure

upstream:

Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
Potrx062499g00020 Belongs to the AAA ATPase family
Potrx066040g00010 Belongs to the AAA ATPase family
Potrx055315g00020 UBA and UBX domain-containing protein
Regulatory gene
Potrx002235g00010 Protein BASIC PENTACYSTEINE2-like
Potrx002424g00040 Protein BASIC PENTACYSTEINE4-like
Potrx003399g00030 GAGA binding protein-like family

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
KEGG Term Name Description
map04141 Protein processing in endoplasmic reticulum The endoplasmic reticulum (ER) is a subcellular organelle where proteins are folded with the help of lumenal chaperones. Newly synthesized peptides enter the ER via the sec61 pore and are glycosylated. Correctly folded proteins are packaged into transport vesicles that shuttle them to the Golgi complex. Misfolded proteins are retained within the ER lumen in complex with molecular chaperones. Proteins that are terminally misfolded bind to BiP and are directed toward degradation through the proteasome in a process called ER-associated degradation (ERAD). Accumulation of misfolded proteins in the ER causes ER stress and activates a signaling pathway called the unfolded protein response (UPR). In certain severe situations, however, the protective mechanisms activated by the UPR are not sufficient to restore normal ER function and cells die by apoptosis.