Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
Potrx052197g00010
View in Genome Browser
Position
Potrx052197:3-2832 (-)
2829bp
Gene Type
gene
Gene Description (Protein Product)
WD-40 repeat-containing protein
Organism
Populus tremula x Populus tremuloides
Also AS Potri.004G175300AT2G16780Potri.004G175300.v4.1

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
Potrx059685g00010 DNA damage-binding protein
Potrx055415g00020 WD-40 repeat-containing protein
Potrx061017g00010 WD-40 repeat-containing protein
Regulatory gene
Potrx000259g00020 B3 domain-containing transcription factor
Potrx000278g00040 SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains
Potrx000718g00010 B3 DNA binding domain

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0000151 ubiquitin ligase complex CC
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0005829 cytosol CC
GO:0031461 cullin-RING ubiquitin ligase complex CC
GO:0032991 protein-containing complex CC
GO:0044424 obsolete intracellular part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044464 obsolete cell part CC
GO:0080008 Cul4-RING E3 ubiquitin ligase complex CC
GO:1902494 catalytic complex CC
GO:1990234 transferase complex CC