PPGR - Gene Detail

Basic Information

Gene Structure

Domain

Regulation&
Interaction

Annotation

Orthologus Group

Expresssion

Pathway

Basic Information

Gene ID	Potrx062533g00020 View in Genome Browser
Position	Potrx062533:2555-6284 (-) 3729bp
Gene Type	gene
Gene Description (Protein Product)	Belongs to the 14-3-3 family Regulator of chromosome condensation (RCC1) repeat
Organism	Populus tremula x Populus tremuloides
Also AS	Potri.004G101700AT3G02520Potri.004G101700.v4.1

upstream:

Domain

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Regulation&Interaction

Protein-protein interaction (PPI)

Potrx065286g00010 serine threonine-protein phosphatase

Potrx063522g00010 serine threonine-protein phosphatase

Potrx062533g00020 Regulator of chromosome condensation (RCC1) repeat

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Annotation

Orthologous Group

Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

Expression Profile

DataSet	Number of Samples expressed(TPM>1)	Mean	Min	Max	Standard deviation(SD)	Coeffcient variation(CV)

Select Expression

Pathway

GO Term	Description	GO Category
GO:0000075	cell cycle checkpoint signaling	BP
GO:0000077	DNA damage checkpoint signaling	BP
GO:0000166	nucleotide binding	MF
GO:0001505	regulation of neurotransmitter levels	BP
GO:0001932	regulation of protein phosphorylation	BP
GO:0001933	negative regulation of protein phosphorylation	BP
GO:0003674	molecular_function	MF
GO:0003676	nucleic acid binding	MF
GO:0003677	DNA binding	MF
GO:0003824	catalytic activity	MF
GO:0004620	phospholipase activity	MF
GO:0004623	phospholipase A2 activity	MF
GO:0004857	enzyme inhibitor activity	MF
GO:0004860	protein kinase inhibitor activity	MF
GO:0005488	binding	MF
GO:0005524	ATP binding	MF
GO:0005575	cellular_component	CC
GO:0005618	cell wall	CC
GO:0005622	intracellular anatomical structure	CC
GO:0005623	obsolete cell	CC
GO:0005634	nucleus	CC
GO:0005737	cytoplasm	CC
GO:0005739	mitochondrion	CC
GO:0005794	Golgi apparatus	CC
GO:0005829	cytosol	CC
GO:0005886	plasma membrane	CC
GO:0005911	cell-cell junction	CC
GO:0006082	organic acid metabolic process	BP
GO:0006469	negative regulation of protein kinase activity	BP
GO:0006520	amino acid metabolic process	BP
GO:0006568	tryptophan metabolic process	BP
GO:0006576	biogenic amine metabolic process	BP
GO:0006586	indolalkylamine metabolic process	BP
GO:0006587	serotonin biosynthetic process from tryptophan	BP
GO:0006588	obsolete activation of tryptophan 5-monooxygenase activity	BP
GO:0006725	cellular aromatic compound metabolic process	BP
GO:0006807	nitrogen compound metabolic process	BP
GO:0006950	response to stress	BP
GO:0006974	cellular response to DNA damage stimulus	BP
GO:0008144	obsolete drug binding	MF
GO:0008150	biological_process	BP
GO:0008152	metabolic process	BP
GO:0008426	protein kinase C inhibitor activity	MF
GO:0009058	biosynthetic process	BP
GO:0009072	aromatic amino acid metabolic process	BP
GO:0009308	amine metabolic process	BP
GO:0009506	plasmodesma	CC
GO:0009507	chloroplast	CC
GO:0009536	plastid	CC
GO:0009892	negative regulation of metabolic process	BP
GO:0009893	positive regulation of metabolic process	BP
GO:0009987	cellular process	BP
GO:0010035	response to inorganic substance	BP
GO:0010038	response to metal ion	BP
GO:0010468	regulation of gene expression	BP
GO:0010563	negative regulation of phosphorus metabolic process	BP
GO:0010605	negative regulation of macromolecule metabolic process	BP
GO:0012505	endomembrane system	CC
GO:0016020	membrane	CC
GO:0016298	lipase activity	MF
GO:0016787	hydrolase activity	MF
GO:0016788	hydrolase activity, acting on ester bonds	MF
GO:0017076	purine nucleotide binding	MF
GO:0018130	heterocycle biosynthetic process	BP
GO:0018958	phenol-containing compound metabolic process	BP
GO:0019207	kinase regulator activity	MF
GO:0019210	kinase inhibitor activity	MF
GO:0019220	regulation of phosphate metabolic process	BP
GO:0019222	regulation of metabolic process	BP
GO:0019438	aromatic compound biosynthetic process	BP
GO:0019752	carboxylic acid metabolic process	BP
GO:0019887	protein kinase regulator activity	MF
GO:0030054	cell junction	CC
GO:0030234	enzyme regulator activity	MF
GO:0030291	protein serine/threonine kinase inhibitor activity	MF
GO:0030312	external encapsulating structure	CC
GO:0030554	adenyl nucleotide binding	MF
GO:0031323	regulation of cellular metabolic process	BP
GO:0031324	negative regulation of cellular metabolic process	BP
GO:0031399	regulation of protein modification process	BP
GO:0031400	negative regulation of protein modification process	BP
GO:0031570	DNA integrity checkpoint signaling	BP
GO:0032268	regulation of protein metabolic process	BP
GO:0032269	negative regulation of protein metabolic process	BP
GO:0032553	ribonucleotide binding	MF
GO:0032555	purine ribonucleotide binding	MF
GO:0032559	adenyl ribonucleotide binding	MF
GO:0032768	regulation of monooxygenase activity	BP
GO:0032770	positive regulation of monooxygenase activity	BP
GO:0033554	cellular response to stress	BP
GO:0033673	negative regulation of kinase activity	BP
GO:0034641	cellular nitrogen compound metabolic process	BP
GO:0035639	purine ribonucleoside triphosphate binding	MF
GO:0036094	small molecule binding	MF
GO:0042133	neurotransmitter metabolic process	BP
GO:0042136	neurotransmitter biosynthetic process	BP
GO:0042221	response to chemical	BP
GO:0042325	regulation of phosphorylation	BP
GO:0042326	negative regulation of phosphorylation	BP
GO:0042427	serotonin biosynthetic process	BP
GO:0042428	serotonin metabolic process	BP
GO:0042430	indole-containing compound metabolic process	BP
GO:0042435	indole-containing compound biosynthetic process	BP
GO:0043085	positive regulation of catalytic activity	BP
GO:0043086	negative regulation of catalytic activity	BP
GO:0043167	ion binding	MF
GO:0043168	anion binding	MF
GO:0043226	organelle	CC
GO:0043227	membrane-bounded organelle	CC
GO:0043229	intracellular organelle	CC
GO:0043231	intracellular membrane-bounded organelle	CC
GO:0043436	oxoacid metabolic process	BP
GO:0043549	regulation of kinase activity	BP
GO:0044092	negative regulation of molecular function	BP
GO:0044093	positive regulation of molecular function	BP
GO:0044106	amine metabolic process	BP
GO:0044237	cellular metabolic process	BP
GO:0044238	primary metabolic process	BP
GO:0044249	cellular biosynthetic process	BP
GO:0044271	cellular nitrogen compound biosynthetic process	BP
GO:0044281	small molecule metabolic process	BP
GO:0044424	obsolete intracellular part	CC
GO:0044444	obsolete cytoplasmic part	CC
GO:0044464	obsolete cell part	CC
GO:0044877	protein-containing complex binding	MF
GO:0045786	negative regulation of cell cycle	BP
GO:0045859	regulation of protein kinase activity	BP
GO:0045936	negative regulation of phosphate metabolic process	BP
GO:0046189	phenol-containing compound biosynthetic process	BP
GO:0046483	heterocycle metabolic process	BP
GO:0046686	response to cadmium ion	BP
GO:0048518	positive regulation of biological process	BP
GO:0048519	negative regulation of biological process	BP
GO:0048523	negative regulation of cellular process	BP
GO:0050789	regulation of biological process	BP
GO:0050790	regulation of catalytic activity	BP
GO:0050794	regulation of cellular process	BP
GO:0050896	response to stimulus	BP
GO:0051171	regulation of nitrogen compound metabolic process	BP
GO:0051172	negative regulation of nitrogen compound metabolic process	BP
GO:0051174	regulation of phosphorus metabolic process	BP
GO:0051246	regulation of protein metabolic process	BP
GO:0051248	negative regulation of protein metabolic process	BP
GO:0051338	regulation of transferase activity	BP
GO:0051341	regulation of oxidoreductase activity	BP
GO:0051348	negative regulation of transferase activity	BP
GO:0051353	positive regulation of oxidoreductase activity	BP
GO:0051716	cellular response to stimulus	BP
GO:0051726	regulation of cell cycle	BP
GO:0052689	carboxylic ester hydrolase activity	MF
GO:0055044	symplast	CC
GO:0060255	regulation of macromolecule metabolic process	BP
GO:0065007	biological regulation	BP
GO:0065008	regulation of biological quality	BP
GO:0065009	regulation of molecular function	BP
GO:0071704	organic substance metabolic process	BP
GO:0071900	regulation of protein serine/threonine kinase activity	BP
GO:0071901	negative regulation of protein serine/threonine kinase activity	BP
GO:0071944	cell periphery	CC
GO:0080090	regulation of primary metabolic process	BP
GO:0097159	organic cyclic compound binding	MF
GO:0097164	ammonium ion metabolic process	BP
GO:0097367	carbohydrate derivative binding	MF
GO:0098772	molecular function regulator activity	MF
GO:1901160	primary amino compound metabolic process	BP
GO:1901162	primary amino compound biosynthetic process	BP
GO:1901265	nucleoside phosphate binding	MF
GO:1901360	organic cyclic compound metabolic process	BP
GO:1901362	organic cyclic compound biosynthetic process	BP
GO:1901363	heterocyclic compound binding	MF
GO:1901564	organonitrogen compound metabolic process	BP
GO:1901566	organonitrogen compound biosynthetic process	BP
GO:1901576	organic substance biosynthetic process	BP
GO:1901605	alpha-amino acid metabolic process	BP
GO:1901615	organic hydroxy compound metabolic process	BP
GO:1901617	organic hydroxy compound biosynthetic process	BP