Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Basic Information
Gene ID
Potri.001G088600
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Position
Chr01:7037648-7042360 (-)
4712bp
Gene Type
gene
Gene Description (Protein Product)
Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs)
Organism
Populus trichocarpa
Also AS Potri.001G088600AT4G23980Potri.001G088600.v4.1

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
Potri.001G177500 Aux IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations
Potri.003G056900 Aux IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations
Potri.006G161400 Aux IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations
Regulatory gene
Potri.001G013600 Bromodomain-containing protein
Potri.001G080300 SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains
Potri.001G083700 Homeobox-leucine zipper protein
Target gene
Potri.001G001201 Nuclear pore complex protein
Potri.001G001250 Nuclear pore complex protein
Potri.001G007300 polyamine transporter At3g13620

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)