Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Basic Information
Gene ID
Potri.008G110100
View in Genome Browser
Position
Chr08:6989913-6991479 (+)
1566bp
Gene Type
gene
Gene Description (Protein Product)
H ACA ribonucleoprotein complex subunit 2-like
Organism
Populus trichocarpa
Also AS Potri.008G110100AT5G08180Potri.008G110100.v4.1

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
Potri.013G058400 Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1
Potri.019G034900 Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1
Potri.013G116800 NHP2-like protein 1
Regulatory gene
Potri.001G018400 AP2-like ethylene-responsive transcription factor
Potri.001G041500 AP2-like ethylene-responsive transcription factor
Potri.001G058200 MADS-box protein

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)