Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Basic Information
Gene ID
Potri.013G058400
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Position
Chr13:4266974-4269481 (-)
2507bp
Gene Type
gene
Gene Description (Protein Product)
"Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5
Organism
Populus trichocarpa
Also AS Potri.013G058400AT3G03920Potri.013G058400.v4.1

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
Potri.016G041200 H ACA ribonucleoprotein complex subunit
Potri.019G034900 Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1
Potri.015G092900 Nucleolar protein 56-like
Regulatory gene
Potri.001G002400 WRKY DNA -binding domain
Potri.001G044500 Transcription factor
Potri.001G058200 MADS-box protein

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)