Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Basic Information
Gene ID
Potri.012G059000
View in Genome Browser
Position
Chr12:5816652-5821086 (+)
4434bp
Gene Type
gene
Gene Description (Protein Product)
Transcription elongation factor B polypeptide
Organism
Populus trichocarpa
Also AS Potri.012G059000AT2G42780Potri.012G059000.v4.1

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
Potri.013G004600 FACT complex subunit
Potri.017G078500 Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment of the nucleosome following the passage of RNA polymerase II
Potri.014G056000 Transcription elongation factor implicated in the maintenance of proper chromatin structure in actively transcribed regions
Regulatory gene
Potri.001G086400 Dof zinc finger protein
Potri.001G238400 Dof zinc finger protein
Potri.001G322700 B3 domain-containing transcription factor

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)