Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Basic Information
Gene ID
Potri.014G056000
View in Genome Browser
Position
Chr14:3575535-3575923 (-)
388bp
Gene Type
gene
Gene Description (Protein Product)
Transcription elongation factor implicated in the maintenance of proper chromatin structure in actively transcribed regions
Organism
Populus trichocarpa
Also AS Potri.014G056000AT5G46030Potri.014G056000.v4.1

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
Potri.017G078500 Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment of the nucleosome following the passage of RNA polymerase II
Potri.016G029200 Transcription elongation factor that enhances transcription elongation by RNA polymerase II (RNAPII)
Potri.017G129000 Pyridoxal
Regulatory gene
Potri.001G004700 ethylene-responsive transcription factor
Potri.001G013600 Bromodomain-containing protein
Potri.001G018400 AP2-like ethylene-responsive transcription factor

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)