Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
gene-GBA52_000015
View in Genome Browser
Position
CM035466.1:150613-155239 (+)
4626bp
Gene Type
gene
Gene Description (Protein Product)
Phd finger protein
Organism
Prunus armeniaca
Also AS MD08G1249900AT2G02470PRUPE_1G587000

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
gene-GBA52_014768 SPRY domain
gene-GBA52_016020 Retinoblastoma-binding protein
gene-GBA52_006635 PHD finger protein ALFIN-LIKE
Regulatory gene
gene-GBA52_000447 Agamous-like MADS-box protein
gene-GBA52_000461 Agamous-like MADS-box protein AGL12
gene-GBA52_000769 MADS-box transcription factor

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0003674 molecular_function MF
GO:0003676 nucleic acid binding MF
GO:0003677 DNA binding MF
GO:0005488 binding MF
GO:0006417 regulation of translation BP
GO:0006950 response to stress BP
GO:0006970 response to osmotic stress BP
GO:0008150 biological_process BP
GO:0009628 response to abiotic stimulus BP
GO:0009651 response to salt stress BP
GO:0009889 regulation of biosynthetic process BP
GO:0009891 positive regulation of biosynthetic process BP
GO:0009893 positive regulation of metabolic process BP
GO:0009987 cellular process BP
GO:0010468 regulation of gene expression BP
GO:0010556 regulation of macromolecule biosynthetic process BP
GO:0010557 positive regulation of macromolecule biosynthetic process BP
GO:0010604 positive regulation of macromolecule metabolic process BP
GO:0010608 post-transcriptional regulation of gene expression BP
GO:0010628 positive regulation of gene expression BP
GO:0019222 regulation of metabolic process BP
GO:0031323 regulation of cellular metabolic process BP
GO:0031325 positive regulation of cellular metabolic process BP
GO:0031326 regulation of cellular biosynthetic process BP
GO:0031328 positive regulation of cellular biosynthetic process BP
GO:0032268 regulation of protein metabolic process BP
GO:0032270 positive regulation of protein metabolic process BP
GO:0033554 cellular response to stress BP
GO:0034248 regulation of amide metabolic process BP
GO:0034250 positive regulation of amide metabolic process BP
GO:0045727 positive regulation of translation BP
GO:0048518 positive regulation of biological process BP
GO:0048522 positive regulation of cellular process BP
GO:0050789 regulation of biological process BP
GO:0050794 regulation of cellular process BP
GO:0050896 response to stimulus BP
GO:0051171 regulation of nitrogen compound metabolic process BP
GO:0051173 positive regulation of nitrogen compound metabolic process BP
GO:0051246 regulation of protein metabolic process BP
GO:0051247 positive regulation of protein metabolic process BP
GO:0051716 cellular response to stimulus BP
GO:0060255 regulation of macromolecule metabolic process BP
GO:0065007 biological regulation BP
GO:0071214 cellular response to abiotic stimulus BP
GO:0071470 cellular response to osmotic stress BP
GO:0071472 cellular response to salt stress BP
GO:0080090 regulation of primary metabolic process BP
GO:0097159 organic cyclic compound binding MF
GO:0104004 cellular response to environmental stimulus BP
GO:1901363 heterocyclic compound binding MF
GO:2000112 regulation of cellular macromolecule biosynthetic process BP