Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
gene-GBA52_027809
View in Genome Browser
Position
CM035470.1:19204579-19206127 (+)
1548bp
Gene Type
gene
Gene Description (Protein Product)
Signal recognition particle 43 kDa protein
Organism
Prunus armeniaca
Also AS MD05G1128900AT2G47450PRUPE_8G173000

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
gene-GBA52_028032 Signal-recognition-particle assembly has a crucial role in targeting secretory proteins to the rough endoplasmic reticulum membrane. SRP9 together with SRP14 and the Alu portion of the SRP RNA, constitutes the elongation arrest domain of SRP. The complex of SRP9 and SRP14 is required for SRP RNA binding
gene-GBA52_029182 Pterin 4 alpha carbinolamine dehydratase
gene-GBA52_027809 Signal recognition particle 43 kDa protein

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0003674 molecular_function MF
GO:0005488 binding MF
GO:0005515 protein binding MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0006605 protein targeting BP
GO:0006612 protein targeting to membrane BP
GO:0006810 transport BP
GO:0006886 intracellular protein transport BP
GO:0008104 protein localization BP
GO:0008150 biological_process BP
GO:0009314 response to radiation BP
GO:0009416 response to light stimulus BP
GO:0009507 chloroplast CC
GO:0009526 plastid envelope CC
GO:0009534 chloroplast thylakoid CC
GO:0009535 chloroplast thylakoid membrane CC
GO:0009536 plastid CC
GO:0009579 thylakoid CC
GO:0009628 response to abiotic stimulus BP
GO:0009642 response to light intensity BP
GO:0009644 response to high light intensity BP
GO:0009941 chloroplast envelope CC
GO:0009987 cellular process BP
GO:0015031 protein transport BP
GO:0015833 peptide transport BP
GO:0016020 membrane CC
GO:0016043 cellular component organization BP
GO:0017038 protein import BP
GO:0019904 protein domain specific binding MF
GO:0022607 cellular component assembly BP
GO:0030674 protein-macromolecule adaptor activity MF
GO:0031967 organelle envelope CC
GO:0031975 envelope CC
GO:0031976 plastid thylakoid CC
GO:0031984 organelle subcompartment CC
GO:0032991 protein-containing complex CC
GO:0033036 macromolecule localization BP
GO:0033365 protein localization to organelle BP
GO:0034357 photosynthetic membrane CC
GO:0034613 protein localization BP
GO:0042651 thylakoid membrane CC
GO:0042802 identical protein binding MF
GO:0042886 amide transport BP
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0043933 protein-containing complex organization BP
GO:0044085 cellular component biogenesis BP
GO:0044422 obsolete organelle part CC
GO:0044424 obsolete intracellular part CC
GO:0044434 obsolete chloroplast part CC
GO:0044435 obsolete plastid part CC
GO:0044436 obsolete thylakoid part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044446 obsolete intracellular organelle part CC
GO:0044464 obsolete cell part CC
GO:0044743 protein transmembrane import into intracellular organelle BP
GO:0045036 protein targeting to chloroplast BP
GO:0045038 protein import into chloroplast thylakoid membrane BP
GO:0045184 establishment of protein localization BP
GO:0046907 intracellular transport BP
GO:0050896 response to stimulus BP
GO:0051179 localization BP
GO:0051234 establishment of localization BP
GO:0051259 protein complex oligomerization BP
GO:0051291 protein heterooligomerization BP
GO:0051641 cellular localization BP
GO:0051649 establishment of localization in cell BP
GO:0055035 plastid thylakoid membrane CC
GO:0055085 transmembrane transport BP
GO:0060090 molecular adaptor activity MF
GO:0065002 intracellular protein transmembrane transport BP
GO:0065003 protein-containing complex assembly BP
GO:0070206 protein trimerization BP
GO:0070208 protein heterotrimerization BP
GO:0070727 cellular macromolecule localization BP
GO:0071702 organic substance transport BP
GO:0071705 nitrogen compound transport BP
GO:0071806 protein transmembrane transport BP
GO:0071840 cellular component organization or biogenesis BP
GO:0072594 establishment of protein localization to organelle BP
GO:0072596 establishment of protein localization to chloroplast BP
GO:0072598 protein localization to chloroplast BP
GO:0072657 protein localization to membrane BP
GO:0090150 establishment of protein localization to membrane BP
GO:0097718 disordered domain specific binding MF