Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
PSME_03176.g
Position
jcf7190000132262:51987-52496 (+)
509bp
Gene Type
gene
Gene Description (Protein Product)
C2HE / C2H2 / C2HC zinc-binding finger
Organism
Pseudotsuga menziesii
Also AS AT5G01305

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
PSME_50132.g DNA repair protein
PSME_18308.g DNA repair protein
PSME_48205.g DNA polymerase
Target gene
PSME_00033.g Hydrophobic seed protein
PSME_00132.g Ribonuclease H protein
PSME_00162.g Belongs to the UDP-glycosyltransferase family

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0003674 molecular_function MF
GO:0003824 catalytic activity MF
GO:0006139 nucleobase-containing compound metabolic process BP
GO:0006163 purine nucleotide metabolic process BP
GO:0006725 cellular aromatic compound metabolic process BP
GO:0006753 nucleoside phosphate metabolic process BP
GO:0006790 sulfur compound metabolic process BP
GO:0006793 phosphorus metabolic process BP
GO:0006796 phosphate-containing compound metabolic process BP
GO:0006807 nitrogen compound metabolic process BP
GO:0008150 biological_process BP
GO:0008152 metabolic process BP
GO:0009117 nucleotide metabolic process BP
GO:0009150 purine ribonucleotide metabolic process BP
GO:0009259 ribonucleotide metabolic process BP
GO:0009987 cellular process BP
GO:0016787 hydrolase activity MF
GO:0016817 hydrolase activity, acting on acid anhydrides MF
GO:0016819 hydrolase activity, acting on acid anhydrides, in sulfonyl-containing anhydrides MF
GO:0019637 organophosphate metabolic process BP
GO:0019693 ribose phosphate metabolic process BP
GO:0034641 cellular nitrogen compound metabolic process BP
GO:0044237 cellular metabolic process BP
GO:0044238 primary metabolic process BP
GO:0044281 small molecule metabolic process BP
GO:0046483 heterocycle metabolic process BP
GO:0047627 adenylylsulfatase activity MF
GO:0055086 nucleobase-containing small molecule metabolic process BP
GO:0071704 organic substance metabolic process BP
GO:0072521 purine-containing compound metabolic process BP
GO:1901135 carbohydrate derivative metabolic process BP
GO:1901360 organic cyclic compound metabolic process BP
GO:1901564 organonitrogen compound metabolic process BP