Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
PSME_33661.g
Position
jcf7190000042867:339031-343444 (+)
4413bp
Gene Type
gene
Gene Description (Protein Product)
Belongs to the glycosyl hydrolase 17 family
Organism
Pseudotsuga menziesii
Also AS AT4G18340

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
PSME_34493.g Belongs to the plant dehydrin family
PSME_37278.g U-box domain-containing protein
PSME_34097.g Microsomal signal peptidase 12 kDa subunit (SPC12)
Regulatory gene
PSME_01715.g transcription factor
PSME_03176.g C2HE / C2H2 / C2HC zinc-binding finger
PSME_03590.g Myb-like DNA-binding domain

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0001871 obsolete pattern binding MF
GO:0003674 molecular_function MF
GO:0003824 catalytic activity MF
GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds MF
GO:0005488 binding MF
GO:0005575 cellular_component CC
GO:0005618 cell wall CC
GO:0005623 obsolete cell CC
GO:0005886 plasma membrane CC
GO:0007154 cell communication BP
GO:0008150 biological_process BP
GO:0008422 beta-glucosidase activity MF
GO:0009505 plant-type cell wall CC
GO:0009987 cellular process BP
GO:0015926 glucosidase activity MF
GO:0016020 membrane CC
GO:0016787 hydrolase activity MF
GO:0016798 hydrolase activity, acting on glycosyl bonds MF
GO:0030246 carbohydrate binding MF
GO:0030247 polysaccharide binding MF
GO:0030312 external encapsulating structure CC
GO:0031224 obsolete intrinsic component of membrane CC
GO:0031225 obsolete anchored component of membrane CC
GO:0031226 obsolete intrinsic component of plasma membrane CC
GO:0042973 glucan endo-1,3-beta-D-glucosidase activity MF
GO:0044425 obsolete membrane part CC
GO:0044459 obsolete plasma membrane part CC
GO:0044464 obsolete cell part CC
GO:0046658 obsolete anchored component of plasma membrane CC
GO:0071944 cell periphery CC