Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
PSME_46432.g
Position
jcf7190000018237:188-115750 (-)
115562bp
Gene Type
gene
Gene Description (Protein Product)
Belongs to the Ca(2 ) cation antiporter (CaCA) (TC 2.A.19) family
Organism
Pseudotsuga menziesii
Also AS AT2G47600

Gene Structure

upstream:
Get Sequence

Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
PSME_50051.g signal peptidase
PSME_48043.g Signal peptidase complex catalytic subunit
PSME_46564.g Acyl-coenzyme A thioesterase
Regulatory gene
PSME_01516.g transcription factor
PSME_05483.g transcription factor
PSME_09926.g Homeobox-leucine zipper protein

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0003008 system process BP
GO:0003674 molecular_function MF
GO:0005215 transporter activity MF
GO:0005432 calcium:sodium antiporter activity MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0005739 mitochondrion CC
GO:0005856 cytoskeleton CC
GO:0005874 microtubule CC
GO:0005886 plasma membrane CC
GO:0005887 plasma membrane CC
GO:0006810 transport BP
GO:0006811 monoatomic ion transport BP
GO:0006812 monoatomic cation transport BP
GO:0006814 sodium ion transport BP
GO:0006816 calcium ion transport BP
GO:0006873 intracellular monoatomic ion homeostasis BP
GO:0006874 intracellular calcium ion homeostasis BP
GO:0006875 obsolete intracellular metal ion homeostasis BP
GO:0007204 positive regulation of cytosolic calcium ion concentration BP
GO:0007275 multicellular organism development BP
GO:0007399 nervous system development BP
GO:0007417 central nervous system development BP
GO:0007420 brain development BP
GO:0007584 response to nutrient BP
GO:0007610 behavior BP
GO:0007611 learning or memory BP
GO:0007612 learning BP
GO:0007613 memory BP
GO:0008150 biological_process BP
GO:0008324 monoatomic cation transmembrane transporter activity MF
GO:0009605 response to external stimulus BP
GO:0009987 cellular process BP
GO:0009991 response to extracellular stimulus BP
GO:0010033 response to organic substance BP
GO:0010646 regulation of cell communication BP
GO:0010647 positive regulation of cell communication BP
GO:0014070 response to organic cyclic compound BP
GO:0015075 monoatomic ion transmembrane transporter activity MF
GO:0015077 inorganic cation transmembrane transporter activity MF
GO:0015081 sodium ion transmembrane transporter activity MF
GO:0015085 calcium ion transmembrane transporter activity MF
GO:0015291 secondary active transmembrane transporter activity MF
GO:0015297 antiporter activity MF
GO:0015298 obsolete solute:monoatomic cation antiporter activity MF
GO:0015318 inorganic molecular entity transmembrane transporter activity MF
GO:0015368 calcium:monoatomic cation antiporter activity MF
GO:0015491 obsolete cation:cation antiporter activity MF
GO:0015630 microtubule cytoskeleton CC
GO:0015672 inorganic cation transmembrane transport BP
GO:0016020 membrane CC
GO:0016021 membrane CC
GO:0019725 cellular homeostasis BP
GO:0021537 telencephalon development BP
GO:0022804 active transmembrane transporter activity MF
GO:0022857 transmembrane transporter activity MF
GO:0022890 inorganic cation transmembrane transporter activity MF
GO:0023051 regulation of signaling BP
GO:0023056 positive regulation of signaling BP
GO:0030001 metal ion transport BP
GO:0030003 intracellular monoatomic cation homeostasis BP
GO:0030425 dendrite CC
GO:0030900 forebrain development BP
GO:0031224 obsolete intrinsic component of membrane CC
GO:0031226 obsolete intrinsic component of plasma membrane CC
GO:0031667 response to nutrient levels BP
GO:0032501 multicellular organismal process BP
GO:0032502 developmental process BP
GO:0033273 response to vitamin BP
GO:0033280 response to vitamin D BP
GO:0033993 response to lipid BP
GO:0034220 monoatomic ion transmembrane transport BP
GO:0035725 sodium ion transmembrane transport BP
GO:0036477 somatodendritic compartment CC
GO:0042221 response to chemical BP
GO:0042592 homeostatic process BP
GO:0042995 cell projection CC
GO:0043005 neuron projection CC
GO:0043025 neuronal cell body CC
GO:0043197 dendritic spine CC
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043228 non-membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0043232 intracellular non-membrane-bounded organelle CC
GO:0044297 cell body CC
GO:0044309 neuron spine CC
GO:0044422 obsolete organelle part CC
GO:0044424 obsolete intracellular part CC
GO:0044425 obsolete membrane part CC
GO:0044430 obsolete cytoskeletal part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044446 obsolete intracellular organelle part CC
GO:0044456 obsolete synapse part CC
GO:0044459 obsolete plasma membrane part CC
GO:0044463 obsolete cell projection part CC
GO:0044464 obsolete cell part CC
GO:0045202 synapse CC
GO:0046873 metal ion transmembrane transporter activity MF
GO:0048167 regulation of synaptic plasticity BP
GO:0048168 regulation of neuronal synaptic plasticity BP
GO:0048172 regulation of short-term neuronal synaptic plasticity BP
GO:0048513 animal organ development BP
GO:0048518 positive regulation of biological process BP
GO:0048522 positive regulation of cellular process BP
GO:0048731 system development BP
GO:0048856 anatomical structure development BP
GO:0048878 chemical homeostasis BP
GO:0050789 regulation of biological process BP
GO:0050794 regulation of cellular process BP
GO:0050801 monoatomic ion homeostasis BP
GO:0050804 modulation of chemical synaptic transmission BP
GO:0050806 positive regulation of synaptic transmission BP
GO:0050877 nervous system process BP
GO:0050890 cognition BP
GO:0050896 response to stimulus BP
GO:0051179 localization BP
GO:0051234 establishment of localization BP
GO:0051480 regulation of cytosolic calcium ion concentration BP
GO:0051641 cellular localization BP
GO:0051649 establishment of localization in cell BP
GO:0055065 obsolete metal ion homeostasis BP
GO:0055074 calcium ion homeostasis BP
GO:0055080 monoatomic cation homeostasis BP
GO:0055082 intracellular chemical homeostasis BP
GO:0055085 transmembrane transport BP
GO:0060291 long-term synaptic potentiation BP
GO:0060322 head development BP
GO:0060401 calcium ion transmembrane import into cytosol BP
GO:0060402 calcium ion transport into cytosol BP
GO:0065007 biological regulation BP
GO:0065008 regulation of biological quality BP
GO:0070509 calcium ion import BP
GO:0070588 calcium ion transmembrane transport BP
GO:0070838 metal ion transport BP
GO:0071944 cell periphery CC
GO:0072503 obsolete cellular divalent inorganic cation homeostasis BP
GO:0072507 obsolete divalent inorganic cation homeostasis BP
GO:0072511 inorganic cation transmembrane transport BP
GO:0097447 dendritic tree CC
GO:0097458 obsolete neuron part CC
GO:0097553 calcium ion transmembrane import into cytosol BP
GO:0098655 monoatomic cation transmembrane transport BP
GO:0098657 import into cell BP
GO:0098659 inorganic cation import across plasma membrane BP
GO:0098660 inorganic ion transmembrane transport BP
GO:0098662 inorganic cation transmembrane transport BP
GO:0098703 calcium ion import across plasma membrane BP
GO:0098739 import across plasma membrane BP
GO:0098771 inorganic ion homeostasis BP
GO:0098794 postsynapse CC
GO:0099080 supramolecular complex CC
GO:0099081 supramolecular polymer CC
GO:0099177 regulation of trans-synaptic signaling BP
GO:0099512 supramolecular fiber CC
GO:0099513 polymeric cytoskeletal fiber CC
GO:0099516 antiporter activity MF
GO:0099587 inorganic ion import across plasma membrane BP
GO:0120025 plasma membrane bounded cell projection CC
GO:0120038 obsolete plasma membrane bounded cell projection part CC
GO:1901660 calcium ion export BP
GO:1901700 response to oxygen-containing compound BP
GO:1902656 calcium ion import into cytosol BP
GO:1990034 calcium ion export across plasma membrane BP