Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
PSME_47042.g
Position
jcf7190000016484:184943-185654 (-)
711bp
Gene Type
gene
Gene Description (Protein Product)
NAC domain-containing protein
Organism
Pseudotsuga menziesii
Also AS AT1G01720

Gene Structure

upstream:
Get Sequence

Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
PSME_51212.g Topless-related protein
PSME_47042.g NAC domain-containing protein
PSME_47158.g Topless-related protein
Regulatory gene
PSME_00031.g ZINC FINGER protein
PSME_00528.g ZINC FINGER protein
PSME_00672.g zinc finger
Target gene
PSME_00011.g Sodium Bile acid symporter family
PSME_00019.g Domain of unknown function (DUF4228)
PSME_00021.g Ethylene-responsive transcription factor

Load All Networks

Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0003674 molecular_function MF
GO:0003676 nucleic acid binding MF
GO:0003677 DNA binding MF
GO:0005488 binding MF
GO:0005515 protein binding MF
GO:0006355 regulation of DNA-templated transcription BP
GO:0008150 biological_process BP
GO:0009889 regulation of biosynthetic process BP
GO:0010468 regulation of gene expression BP
GO:0010556 regulation of macromolecule biosynthetic process BP
GO:0019219 regulation of nucleobase-containing compound metabolic process BP
GO:0019222 regulation of metabolic process BP
GO:0031323 regulation of cellular metabolic process BP
GO:0031326 regulation of cellular biosynthetic process BP
GO:0042802 identical protein binding MF
GO:0042803 protein homodimerization activity MF
GO:0043565 sequence-specific DNA binding MF
GO:0046983 protein dimerization activity MF
GO:0047484 regulation of response to osmotic stress BP
GO:0048518 positive regulation of biological process BP
GO:0048583 regulation of response to stimulus BP
GO:0048584 positive regulation of response to stimulus BP
GO:0050789 regulation of biological process BP
GO:0050794 regulation of cellular process BP
GO:0051171 regulation of nitrogen compound metabolic process BP
GO:0051252 regulation of RNA metabolic process BP
GO:0060255 regulation of macromolecule metabolic process BP
GO:0065007 biological regulation BP
GO:0080090 regulation of primary metabolic process BP
GO:0080134 regulation of response to stress BP
GO:0097159 organic cyclic compound binding MF
GO:1901000 regulation of response to salt stress BP
GO:1901002 positive regulation of response to salt stress BP
GO:1901363 heterocyclic compound binding MF
GO:1902584 positive regulation of response to water deprivation BP
GO:1903506 regulation of nucleic acid-templated transcription BP
GO:2000070 regulation of response to water deprivation BP
GO:2000112 regulation of cellular macromolecule biosynthetic process BP
GO:2001141 regulation of RNA biosynthetic process BP