Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
PSME_50351.g
Position
jcf7190000031606:194585-544051 (-)
349466bp
Gene Type
gene
Gene Description (Protein Product)
Epimerase family protein SDR39U1
Organism
Pseudotsuga menziesii
Also AS AT2G21280

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
PSME_51350.g Chloroplast stem-loop binding protein of 41 kDa a
PSME_50351.g Epimerase family protein SDR39U1
PSME_50875.g -
Regulatory gene
PSME_00031.g ZINC FINGER protein
PSME_00528.g ZINC FINGER protein
PSME_00623.g GAGA binding protein-like family

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0003674 molecular_function MF
GO:0005488 binding MF
GO:0005515 protein binding MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0006996 organelle organization BP
GO:0008150 biological_process BP
GO:0009507 chloroplast CC
GO:0009526 plastid envelope CC
GO:0009536 plastid CC
GO:0009657 plastid organization BP
GO:0009658 chloroplast organization BP
GO:0009941 chloroplast envelope CC
GO:0009987 cellular process BP
GO:0010020 chloroplast fission BP
GO:0016043 cellular component organization BP
GO:0031967 organelle envelope CC
GO:0031975 envelope CC
GO:0042802 identical protein binding MF
GO:0042803 protein homodimerization activity MF
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0043572 plastid fission BP
GO:0044422 obsolete organelle part CC
GO:0044424 obsolete intracellular part CC
GO:0044434 obsolete chloroplast part CC
GO:0044435 obsolete plastid part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044446 obsolete intracellular organelle part CC
GO:0044464 obsolete cell part CC
GO:0046983 protein dimerization activity MF
GO:0048285 organelle fission BP
GO:0071840 cellular component organization or biogenesis BP