Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
PSME_50663.g
Position
jcf7190000005770:284244-351425 (-)
67181bp
Gene Type
gene
Gene Description (Protein Product)
acyl-CoA-binding domain-containing protein
Organism
Pseudotsuga menziesii
Also AS AT3G05420

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
PSME_50865.g Belongs to the actin-binding proteins ADF family
PSME_51169.g HMGL-like
PSME_50663.g acyl-CoA-binding domain-containing protein
Regulatory gene
PSME_00595.g Mini zinc finger protein
PSME_00955.g Mini zinc finger protein
PSME_01407.g Mini zinc finger protein

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0000062 fatty-acyl-CoA binding MF
GO:0000166 nucleotide binding MF
GO:0001101 response to acid chemical BP
GO:0001666 response to hypoxia BP
GO:0003674 molecular_function MF
GO:0005488 binding MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005634 nucleus CC
GO:0005737 cytoplasm CC
GO:0005829 cytosol CC
GO:0006810 transport BP
GO:0006869 lipid transport BP
GO:0006950 response to stress BP
GO:0008150 biological_process BP
GO:0009314 response to radiation BP
GO:0009416 response to light stimulus BP
GO:0009628 response to abiotic stimulus BP
GO:0009719 response to endogenous stimulus BP
GO:0009723 response to ethylene BP
GO:0009725 response to hormone BP
GO:0009753 response to jasmonic acid BP
GO:0010033 response to organic substance BP
GO:0010876 lipid localization BP
GO:0017076 purine nucleotide binding MF
GO:0030554 adenyl nucleotide binding MF
GO:0032553 ribonucleotide binding MF
GO:0032555 purine ribonucleotide binding MF
GO:0032559 adenyl ribonucleotide binding MF
GO:0033036 macromolecule localization BP
GO:0033218 amide binding MF
GO:0036094 small molecule binding MF
GO:0036293 response to decreased oxygen levels BP
GO:0042221 response to chemical BP
GO:0043167 ion binding MF
GO:0043168 anion binding MF
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0044424 obsolete intracellular part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044464 obsolete cell part CC
GO:0048037 obsolete cofactor binding MF
GO:0050662 obsolete coenzyme binding MF
GO:0050896 response to stimulus BP
GO:0051179 localization BP
GO:0051234 establishment of localization BP
GO:0070482 response to oxygen levels BP
GO:0071702 organic substance transport BP
GO:0097159 organic cyclic compound binding MF
GO:0097367 carbohydrate derivative binding MF
GO:1901265 nucleoside phosphate binding MF
GO:1901363 heterocyclic compound binding MF
GO:1901567 fatty acid derivative binding MF
GO:1901681 sulfur compound binding MF
GO:1901700 response to oxygen-containing compound BP