Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
PSME_51131.g
Position
jcf7190000078891:1209672-1402270 (+)
192598bp
Gene Type
gene
Gene Description (Protein Product)
Ubiquitin-like-specific protease 1D
Organism
Pseudotsuga menziesii
Also AS AT1G60220

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
PSME_51293.g SUMO-activating enzyme subunit
Regulatory gene
PSME_01715.g transcription factor
PSME_01840.g zinc finger CCCH domain-containing protein
PSME_03176.g C2HE / C2H2 / C2HC zinc-binding finger

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0000003 reproduction BP
GO:0003006 developmental process involved in reproduction BP
GO:0003674 molecular_function MF
GO:0003824 catalytic activity MF
GO:0004175 endopeptidase activity MF
GO:0004197 cysteine-type endopeptidase activity MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005634 nucleus CC
GO:0006464 protein modification process BP
GO:0006508 proteolysis BP
GO:0006807 nitrogen compound metabolic process BP
GO:0006950 response to stress BP
GO:0006970 response to osmotic stress BP
GO:0007275 multicellular organism development BP
GO:0008150 biological_process BP
GO:0008152 metabolic process BP
GO:0008233 peptidase activity MF
GO:0008234 cysteine-type peptidase activity MF
GO:0009628 response to abiotic stimulus BP
GO:0009651 response to salt stress BP
GO:0009791 post-embryonic development BP
GO:0009987 cellular process BP
GO:0010228 vegetative to reproductive phase transition of meristem BP
GO:0016787 hydrolase activity MF
GO:0016926 protein desumoylation BP
GO:0016929 deSUMOylase activity MF
GO:0018193 peptidyl-amino acid modification BP
GO:0018205 peptidyl-lysine modification BP
GO:0019538 protein metabolic process BP
GO:0019783 ubiquitin-like protein peptidase activity MF
GO:0022414 reproductive process BP
GO:0032501 multicellular organismal process BP
GO:0032502 developmental process BP
GO:0036211 protein modification process BP
GO:0043170 macromolecule metabolic process BP
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0043412 macromolecule modification BP
GO:0044237 cellular metabolic process BP
GO:0044238 primary metabolic process BP
GO:0044260 cellular macromolecule metabolic process BP
GO:0044267 protein metabolic process BP
GO:0044424 obsolete intracellular part CC
GO:0044464 obsolete cell part CC
GO:0048608 reproductive structure development BP
GO:0048731 system development BP
GO:0048856 anatomical structure development BP
GO:0050896 response to stimulus BP
GO:0061458 reproductive system development BP
GO:0070011 peptidase activity MF
GO:0070122 obsolete isopeptidase activity MF
GO:0070137 ubiquitin-like protein-specific endopeptidase activity MF
GO:0070138 ubiquitin-like protein peptidase activity MF
GO:0070139 SUMO-specific endopeptidase activity MF
GO:0070140 deSUMOylase activity MF
GO:0070646 protein modification by small protein removal BP
GO:0070647 protein modification by small protein conjugation or removal BP
GO:0071704 organic substance metabolic process BP
GO:0140096 catalytic activity, acting on a protein MF
GO:1901564 organonitrogen compound metabolic process BP