PPGR - Gene Detail

Basic Information

Gene ID	gene-LOC103952749 View in Genome Browser
Position	NW_025999635.1:4222319-4224757 (-) 2438bp
Gene Type	gene
Gene Description (Protein Product)	Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family
Organism	Pyrus x bretschneideri
Also AS	MD01G1178300AT5G61520

upstream:

Domain

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Regulation&Interaction

Protein-protein interaction (PPI)

gene-LOC103955151 Belongs to the multi antimicrobial extrusion (MATE) (TC 2.A.66.1) family

gene-LOC125473734 Ubiquitin exists either covalently attached to another protein; or free (unanchored). When covalently bound; it is conjugated to target proteins via an isopeptide bond either as a monomer (monoubiquitin); a polymer linked via different Lys residues of the ubiquitin (polyubiquitin chains) or a linear polymer linked via the initiator Met of the ubiquitin (linear polyubiquitin chains). Polyubiquitin chains; when attached to a target protein; have different functions depending on the Lys residue of the ubiquitin that is linked

gene-LOC103954995 Ubiquitin exists either covalently attached to another protein; or free (unanchored). When covalently bound; it is conjugated to target proteins via an isopeptide bond either as a monomer (monoubiquitin); a polymer linked via different Lys residues of the ubiquitin (polyubiquitin chains) or a linear polymer linked via the initiator Met of the ubiquitin (linear polyubiquitin chains). Polyubiquitin chains; when attached to a target protein; have different functions depending on the Lys residue of the ubiquitin that is linked

Regulatory gene

gene-LOC103926655 Nuclear transcription factor Y subunit

gene-LOC103926744 lysine-specific demethylase

gene-LOC103927195 Dof zinc finger protein

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Annotation

Orthologous Group

Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

Expression Profile

DataSet	Number of Samples expressed(TPM>1)	Mean	Min	Max	Standard deviation(SD)	Coeffcient variation(CV)

Select Expression

Pathway

GO Term	Description	GO Category
GO:0005575	cellular_component	CC
GO:0016020	membrane	CC