Basic Information
Gene ID
gene-LOC125478985
Position
NW_025999579.1:3776125-3777233 (+)
1108bp
Gene Type
gene
Gene Description (Protein Product)
ATP synthase subunit beta
Organism
Also AS MD06G1223200ATCG00480

Gene Structure

upstream:

Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
gene-LOC125479292 Essential component of the vacuolar proton pump (V- ATPase); a multimeric enzyme that catalyzes the translocation of protons across the membranes. Required for assembly and activity of the V-ATPase
gene-LOC125480828 60S ribosomal Protein
gene-LOC125479288 Aspartate aminotransferase
Regulatory gene
gene-LOC103926744 lysine-specific demethylase
gene-LOC103927829 ZINC FINGER protein
gene-LOC103928095 ZINC FINGER protein

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
KEGG Term Name Description
map01100 Metabolic pathways -
map00195 Photosynthesis Photosynthesis in green plants and specialized bacteria is the process of utilizing light energy to synthesize organic compounds from carbon dioxide and water. It consists of the light dependent part (light reaction) and the light independent part (dark reaction, carbon fixation). The light reaction takes place in thylakoid, a membrane-bound compartment inside chloroplasts and cyanobacteria. The light energy is used by photosystems I and II to generate proton motive force and reducing power (NADPH or NADH). The proton motive force is used by ATP synthase to generate ATP, essentially in the same way as the mitochondrial respiratory chain. The supplies of ATP and NAD(P)H are then used to fix carbon dioxide.
map00190 Oxidative phosphorylation -