Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
QL12p039952.g
View in Genome Browser
Position
chr12:39948446-39955936 (-)
7490bp
Gene Type
gene
Gene Description (Protein Product)
Interconversion of serine and glycine
Organism
Quercus lobata
Also AS AT4G37930

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
QL12p042634.g Belongs to the TrpA family
QL93p0196_0012.g Tryptophan synthase beta chain
QL93p1879_0003.g Interconversion of serine and glycine
Regulatory gene
QL01p005330.g AP2-like ethylene-responsive transcription factor
QL01p032408.g Dof zinc finger protein
QL01p035865.g transcription factor

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway KEGG Pathway
GO Term Description GO Category
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0005739 mitochondrion CC
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0044424 obsolete intracellular part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044464 obsolete cell part CC
KEGG Term Name Description
map01110 Biosynthesis of secondary metabolites -
map01100 Metabolic pathways -
map00670 One carbon pool by folate -
map00630 Glyoxylate and dicarboxylate metabolism -
map00460 Cyanoamino acid metabolism -
map00260 Glycine, serine and threonine metabolism Serine is derived from 3-phospho-D-glycerate, an intermediate of glycolysis [MD:M00020], and glycine is derived from serine. Threonine is an essential amino acid, which animals cannot synthesize. In bacteria and plants, threonine is derived from aspartate [MD:M00018].