PPGR - Gene Detail

Basic Information

Gene ID	Qrob_T0702170.2.g View in Genome Browser
Position	Qrob_H2.3_Sc0000064:245000-247385 (+) 2385bp
Gene Type	gene
Gene Description (Protein Product)	rhamnose biosynthetic enzyme
Organism	Quercus robur
Also AS	AT1G78570

upstream:

Domain

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Regulation&Interaction

Protein-protein interaction (PPI)

Qrob_T0721890.2.g RmlD substrate binding domain

Qrob_T0702170.2.g rhamnose biosynthetic enzyme

Qrob_T0722860.2.g protein Sb04g004280 source

Load All Networks

Annotation

Orthologous Group

Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

Expression Profile

DataSet	Number of Samples expressed(TPM>1)	Mean	Min	Max	Standard deviation(SD)	Coeffcient variation(CV)

Select Expression

Pathway

GO Term	Description	GO Category
GO:0003674	molecular_function	MF
GO:0003824	catalytic activity	MF
GO:0005575	cellular_component	CC
GO:0005622	intracellular anatomical structure	CC
GO:0005623	obsolete cell	CC
GO:0005737	cytoplasm	CC
GO:0005829	cytosol	CC
GO:0005911	cell-cell junction	CC
GO:0006139	nucleobase-containing compound metabolic process	BP
GO:0006725	cellular aromatic compound metabolic process	BP
GO:0006793	phosphorus metabolic process	BP
GO:0006807	nitrogen compound metabolic process	BP
GO:0006810	transport	BP
GO:0008150	biological_process	BP
GO:0008152	metabolic process	BP
GO:0009058	biosynthetic process	BP
GO:0009225	nucleotide-sugar metabolic process	BP
GO:0009226	nucleotide-sugar biosynthetic process	BP
GO:0009506	plasmodesma	CC
GO:0009812	flavonoid metabolic process	BP
GO:0009813	flavonoid biosynthetic process	BP
GO:0009914	hormone transport	BP
GO:0009966	regulation of signal transduction	BP
GO:0009987	cellular process	BP
GO:0010253	UDP-rhamnose biosynthetic process	BP
GO:0010280	UDP-L-rhamnose synthase activity	MF
GO:0010315	auxin export across the plasma membrane	BP
GO:0010646	regulation of cell communication	BP
GO:0010817	regulation of hormone levels	BP
GO:0010928	regulation of auxin mediated signaling pathway	BP
GO:0016829	lyase activity	MF
GO:0016835	carbon-oxygen lyase activity	MF
GO:0016836	hydro-lyase activity	MF
GO:0018130	heterocycle biosynthetic process	BP
GO:0019438	aromatic compound biosynthetic process	BP
GO:0023051	regulation of signaling	BP
GO:0030054	cell junction	CC
GO:0030154	cell differentiation	BP
GO:0032502	developmental process	BP
GO:0033478	UDP-rhamnose metabolic process	BP
GO:0034641	cellular nitrogen compound metabolic process	BP
GO:0034654	nucleobase-containing compound biosynthetic process	BP
GO:0042127	regulation of cell population proliferation	BP
GO:0042440	pigment metabolic process	BP
GO:0044237	cellular metabolic process	BP
GO:0044238	primary metabolic process	BP
GO:0044249	cellular biosynthetic process	BP
GO:0044271	cellular nitrogen compound biosynthetic process	BP
GO:0044281	small molecule metabolic process	BP
GO:0044424	obsolete intracellular part	CC
GO:0044444	obsolete cytoplasmic part	CC
GO:0044464	obsolete cell part	CC
GO:0046148	pigment biosynthetic process	BP
GO:0046483	heterocycle metabolic process	BP
GO:0048583	regulation of response to stimulus	BP
GO:0048869	cellular developmental process	BP
GO:0050377	UDP-glucose 4,6-dehydratase activity	MF
GO:0050789	regulation of biological process	BP
GO:0050794	regulation of cellular process	BP
GO:0051179	localization	BP
GO:0051234	establishment of localization	BP
GO:0051552	flavone metabolic process	BP
GO:0051553	flavone biosynthetic process	BP
GO:0051554	flavonol metabolic process	BP
GO:0051555	flavonol biosynthetic process	BP
GO:0055044	symplast	CC
GO:0055086	nucleobase-containing small molecule metabolic process	BP
GO:0060918	auxin transport	BP
GO:0065007	biological regulation	BP
GO:0065008	regulation of biological quality	BP
GO:0071704	organic substance metabolic process	BP
GO:1901135	carbohydrate derivative metabolic process	BP
GO:1901137	carbohydrate derivative biosynthetic process	BP
GO:1901360	organic cyclic compound metabolic process	BP
GO:1901362	organic cyclic compound biosynthetic process	BP
GO:1901576	organic substance biosynthetic process	BP
GO:1901615	organic hydroxy compound metabolic process	BP
GO:1901617	organic hydroxy compound biosynthetic process	BP

KEGG Term	Name	Description
map01100	Metabolic pathways	-
map00520	Amino sugar and nucleotide sugar metabolism	-